PMID- 21883550 OWN - NLM STAT- MEDLINE DCOM- 20120504 LR - 20221207 IS - 1365-313X (Electronic) IS - 0960-7412 (Linking) VI - 68 IP - 6 DP - 2011 Dec TI - Chromosomal rearrangements between tomato and Solanum chilense hamper mapping and breeding of the TYLCV resistance gene Ty-1. PG - 1093-103 LID - 10.1111/j.1365-313X.2011.04762.x [doi] AB - Tomato yellow leaf curl disease, a devastating disease of Solanum lycopersicum (tomato), is caused by a complex of begomoviruses generally referred to as Tomato yellow leaf curl virus (TYLCV). Almost all breeding for TYLCV resistance has been based on the introgression of the Ty-1 resistance locus derived from Solanum chilense LA1969. Knowledge about the exact location of Ty-1 on tomato chromosome 6 will help in understanding the genomic organization of the Ty-1 locus. In this study, we analyze the chromosomal rearrangement and recombination behavior of the chromosomal region where Ty-1 is introgressed. Nineteen markers on tomato chromosome 6 were used in F(2) populations obtained from two commercial hybrids, and showed the presence of a large introgression in both. Fluorescence in situ hybridization (FISH) analysis revealed two chromosomal rearrangements between S. lycopersicum and S. chilense LA1969 in the Ty-1 introgression. Furthermore, a large-scale recombinant screening in the two F(2) populations was performed, and 30 recombinants in the Ty-1 introgression were identified. All recombination events were located on the long arm beyond the inversions, showing that recombination in the inverted region was absent. Disease tests on progenies of informative recombinants with TYLCV mapped Ty-1 to the long arm between markers MSc05732-4 and MSc05732-14, an interval overlapping with the reported Ty-3 region, which led to the indication that Ty-1 and Ty-3 may be allelic. With this study we prove that FISH can be used as a diagnostic tool to aid in the accurate mapping of genes that were introgressed from wild species into cultivated tomato. CI - (c) 2011 The Authors. The Plant Journal (c) 2011 Blackwell Publishing Ltd. FAU - Verlaan, Maarten G AU - Verlaan MG AD - Wageningen UR Plant Breeding, Wageningen University, Droevendaalsesteeg 1, 6708 PB Wageningen, the Netherlands. FAU - Szinay, Dora AU - Szinay D FAU - Hutton, Samuel F AU - Hutton SF FAU - de Jong, Hans AU - de Jong H FAU - Kormelink, Richard AU - Kormelink R FAU - Visser, Richard G F AU - Visser RG FAU - Scott, John W AU - Scott JW FAU - Bai, Yuling AU - Bai Y LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PT - Research Support, U.S. Gov't, Non-P.H.S. DEP - 20111013 PL - England TA - Plant J JT - The Plant journal : for cell and molecular biology JID - 9207397 SB - IM MH - Begomovirus/*genetics MH - Chromosome Mapping/methods MH - Chromosomes, Plant/*genetics MH - Disease Resistance/*genetics MH - *Gene Rearrangement MH - *Genes, Plant MH - In Situ Hybridization, Fluorescence MH - Solanum lycopersicum/genetics/virology MH - Plant Diseases/*genetics MH - Recombination, Genetic MH - Solanum/*genetics/virology EDAT- 2011/09/03 06:00 MHDA- 2012/05/05 06:00 CRDT- 2011/09/03 06:00 PHST- 2011/09/03 06:00 [entrez] PHST- 2011/09/03 06:00 [pubmed] PHST- 2012/05/05 06:00 [medline] AID - 10.1111/j.1365-313X.2011.04762.x [doi] PST - ppublish SO - Plant J. 2011 Dec;68(6):1093-103. doi: 10.1111/j.1365-313X.2011.04762.x. Epub 2011 Oct 13.