PMID- 21900305 OWN - NLM STAT- MEDLINE DCOM- 20120215 LR - 20211203 IS - 1741-0134 (Electronic) IS - 1741-0126 (Print) IS - 1741-0126 (Linking) VI - 24 IP - 11 DP - 2011 Nov TI - An evaluation tool for FKBP12-dependent and -independent mTOR inhibitors using a combination of FKBP-mTOR fusion protein, DSC and NMR. PG - 811-7 LID - 10.1093/protein/gzr045 [doi] AB - Mammalian target of rapamycin (mTOR), a large multidomain protein kinase, regulates cell growth and metabolism in response to environmental signals. The FKBP rapamycin-binding (FRB) domain of mTOR is a validated therapeutic target for the development of immunosuppressant and anticancer drugs but is labile and insoluble. Here we designed a fusion protein between FKBP12 and the FRB domain of mTOR. The fusion protein was successfully expressed in Escherichia coli as a soluble form, and was purified by a simple two-step chromatographic procedure. The fusion protein exhibited increased solubility and stability compared with the isolated FRB domain, and facilitated the analysis of rapamycin and FK506 binding using differential scanning calorimetry (DSC) and solution nuclear magnetic resonance (NMR). DSC enabled the rapid observation of protein-drug interactions at the domain level, while NMR gave insights into the protein-drug interactions at the residue level. The use of the FKBP12-FRB fusion protein combined with DSC and NMR provides a useful tool for the efficient screening of FKBP12-dependent as well as -independent inhibitors of the mTOR FRB domain. FAU - Sekiguchi, Mitsuhiro AU - Sekiguchi M AD - Analysis and Pharmacokinetics Research Labs, Department of Drug Discovery, Astellas Pharma Inc., Tsukuba 350-8585, Japan. FAU - Kobashigawa, Yoshihiro AU - Kobashigawa Y FAU - Kawasaki, Masashi AU - Kawasaki M FAU - Yokochi, Masashi AU - Yokochi M FAU - Kiso, Tetsuo AU - Kiso T FAU - Suzumura, Ken-ichi AU - Suzumura K FAU - Mori, Keitaro AU - Mori K FAU - Teramura, Toshio AU - Teramura T FAU - Inagaki, Fuyuhiko AU - Inagaki F LA - eng PT - Evaluation Study PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20110906 PL - England TA - Protein Eng Des Sel JT - Protein engineering, design & selection : PEDS JID - 101186484 RN - 0 (Enzyme Inhibitors) RN - 0 (Ligands) RN - 0 (Recombinant Fusion Proteins) RN - EC 2.7.1.1 (MTOR protein, human) RN - EC 2.7.11.1 (TOR Serine-Threonine Kinases) RN - EC 5.2.1.- (Tacrolimus Binding Protein 1A) SB - IM MH - Calorimetry, Differential Scanning/*methods MH - Enzyme Inhibitors/chemistry/*pharmacology MH - Humans MH - Ligands MH - Magnetic Resonance Spectroscopy/*methods MH - Protein Binding/drug effects MH - Protein Structure, Tertiary MH - Recombinant Fusion Proteins/chemistry/*metabolism MH - TOR Serine-Threonine Kinases/antagonists & inhibitors/chemistry/*metabolism MH - Tacrolimus Binding Protein 1A/antagonists & inhibitors/chemistry/*metabolism PMC - PMC3196870 EDAT- 2011/09/09 06:00 MHDA- 2012/02/16 06:00 PMCR- 2011/09/06 CRDT- 2011/09/09 06:00 PHST- 2011/09/09 06:00 [entrez] PHST- 2011/09/09 06:00 [pubmed] PHST- 2012/02/16 06:00 [medline] PHST- 2011/09/06 00:00 [pmc-release] AID - gzr045 [pii] AID - 10.1093/protein/gzr045 [doi] PST - ppublish SO - Protein Eng Des Sel. 2011 Nov;24(11):811-7. doi: 10.1093/protein/gzr045. Epub 2011 Sep 6.