PMID- 21915631
OWN - NLM
STAT- MEDLINE
DCOM- 20120509
LR  - 20211020
IS  - 1432-184X (Electronic)
IS  - 0095-3628 (Linking)
VI  - 63
IP  - 1
DP  - 2012 Jan
TI  - Diel fluctuations in the abundance and community diversity of coastal 
      bacterioplankton assemblages over a tidal cycle.
PG  - 96-102
LID - 10.1007/s00248-011-9940-6 [doi]
AB  - The diel change in abundance and community diversity of the bacterioplankton 
      assemblages within the Pacific Ocean at a fixed location in Monterey Bay, 
      California (USA) were examined with several culture-independent (i.e., nucleic 
      acid staining, fluorescence in situ hybridization FISH, and 16S ribosomal RNA 
      gene libraries) approaches over a tidal cycle. FISH analyses revealed the 
      quantitative predominance of bacterial members belonging to the 
      Cytophaga-Flavobacterium cluster as well as two Proteobacteria (alpha- and gamma-) 
      subclasses within the bacterioplankton assemblages, especially during high tide 
      (HT) and outgoing tide (OT) than the other tidal events. While the clone 
      libraries showed that majority of the sequences were similar to the 16S rRNA gene 
      sequences of unknown bacteria (32% to 73%), however, the operational taxonomic 
      units from members of the alpha-Proteobacteria, Bacteroidetes, Firmicutes, and 
      Cyanobacteria were also well represented during the four tidal events examined. 
      Comparatively, sequence diversity was highest in OT, lowest in low tide, and very 
      similar between HT and incoming tide. The results indicate that the dynamics of 
      bacterial occurrence and diversity appeared to be more pronounced during HT and 
      OT, further indicative of the ecological importance of several environmental 
      variables including temperature, light intensity, and nutrient availability that 
      are also concurrently fluctuating during these tidal events in marine systems.
FAU - Olapade, Ola A
AU  - Olapade OA
AD  - Department of Biology and the Center for Sustainability and the Environment, 611 
      East Porter Street, Albion College, Albion, MI, 49224, USA. oolapade@albion.edu
LA  - eng
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PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
DEP - 20110914
PL  - United States
TA  - Microb Ecol
JT  - Microbial ecology
JID - 7500663
RN  - 0 (DNA, Bacterial)
RN  - 0 (RNA, Ribosomal, 16S)
SB  - IM
MH  - Bacteria/genetics/*isolation & purification
MH  - Bacterial Typing Techniques
MH  - Bacteroidetes/genetics/isolation & purification
MH  - Bays/*microbiology
MH  - California
MH  - Cyanobacteria/genetics/isolation & purification
MH  - Cytophaga/genetics/isolation & purification
MH  - DNA, Bacterial/analysis/genetics
MH  - Flavobacterium/genetics/isolation & purification
MH  - Genetic Variation
MH  - *Microbial Consortia
MH  - Molecular Sequence Data
MH  - Pacific Ocean
MH  - Plankton/*physiology
MH  - Proteobacteria/genetics/isolation & purification
MH  - RNA, Ribosomal, 16S/genetics
MH  - Seawater/*microbiology
MH  - *Tidal Waves
EDAT- 2011/09/15 06:00
MHDA- 2012/05/10 06:00
CRDT- 2011/09/15 06:00
PHST- 2011/04/04 00:00 [received]
PHST- 2011/09/02 00:00 [accepted]
PHST- 2011/09/15 06:00 [entrez]
PHST- 2011/09/15 06:00 [pubmed]
PHST- 2012/05/10 06:00 [medline]
AID - 10.1007/s00248-011-9940-6 [doi]
PST - ppublish
SO  - Microb Ecol. 2012 Jan;63(1):96-102. doi: 10.1007/s00248-011-9940-6. Epub 2011 Sep 
      14.