PMID- 21949786 OWN - NLM STAT- MEDLINE DCOM- 20120130 LR - 20211020 IS - 1932-6203 (Electronic) IS - 1932-6203 (Linking) VI - 6 IP - 9 DP - 2011 TI - Quantitative phosphoproteomics of CXCL12 (SDF-1) signaling. PG - e24918 LID - 10.1371/journal.pone.0024918 [doi] LID - e24918 AB - CXCL12 (SDF-1) is a chemokine that binds to and signals through the seven transmembrane receptor CXCR4. The CXCL12/CXCR4 signaling axis has been implicated in both cancer metastases and human immunodeficiency virus type 1 (HIV-1) infection and a more complete understanding of CXCL12/CXCR4 signaling pathways may support efforts to develop therapeutics for these diseases. Mass spectrometry-based phosphoproteomics has emerged as an important tool in studying signaling networks in an unbiased fashion. We employed stable isotope labeling with amino acids in cell culture (SILAC) quantitative phosphoproteomics to examine the CXCL12/CXCR4 signaling axis in the human lymphoblastic CEM cell line. We quantified 4,074 unique SILAC pairs from 1,673 proteins and 89 phosphopeptides were deemed CXCL12-responsive in biological replicates. Several well established CXCL12-responsive phosphosites such as AKT (pS473) and ERK2 (pY204) were confirmed in our study. We also validated two novel CXCL12-responsive phosphosites, stathmin (pS16) and AKT1S1 (pT246) by Western blot. Pathway analysis and comparisons with other phosphoproteomic datasets revealed that genes from CXCL12-responsive phosphosites are enriched for cellular pathways such as T cell activation, epidermal growth factor and mammalian target of rapamycin (mTOR) signaling, pathways which have previously been linked to CXCL12/CXCR4 signaling. Several of the novel CXCL12-responsive phosphoproteins from our study have also been implicated with cellular migration and HIV-1 infection, thus providing an attractive list of potential targets for the development of cancer metastasis and HIV-1 therapeutics and for furthering our understanding of chemokine signaling regulation by reversible phosphorylation. FAU - Wojcechowskyj, Jason A AU - Wojcechowskyj JA AD - Department of Microbiology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania, United States of America. FAU - Lee, Jessica Y AU - Lee JY FAU - Seeholzer, Steven H AU - Seeholzer SH FAU - Doms, Robert W AU - Doms RW LA - eng GR - T32 AI007632/AI/NIAID NIH HHS/United States GR - T32 AI 07632/AI/NIAID NIH HHS/United States GR - R01 40880/PHS HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural DEP - 20110920 PL - United States TA - PLoS One JT - PloS one JID - 101285081 RN - 0 (Chemokine CXCL12) RN - 0 (Phosphopeptides) RN - 0 (Phosphoproteins) RN - 0 (Proteome) RN - EC 3.6.1.- (GTP-Binding Proteins) SB - IM MH - Amino Acid Sequence MH - Blotting, Western MH - Cell Line MH - Chemokine CXCL12/*pharmacology MH - GTP-Binding Proteins/metabolism MH - Humans MH - Isotope Labeling MH - Molecular Sequence Data MH - Phosphopeptides/chemistry/metabolism MH - Phosphoproteins/chemistry/*metabolism MH - Proteome/chemistry/metabolism MH - Proteomics/*methods MH - Reproducibility of Results MH - Signal Transduction/*drug effects PMC - PMC3176801 COIS- Competing Interests: The authors have declared that no competing interests exist. EDAT- 2011/09/29 06:00 MHDA- 2012/01/31 06:00 PMCR- 2011/09/20 CRDT- 2011/09/28 06:00 PHST- 2011/06/24 00:00 [received] PHST- 2011/08/19 00:00 [accepted] PHST- 2011/09/28 06:00 [entrez] PHST- 2011/09/29 06:00 [pubmed] PHST- 2012/01/31 06:00 [medline] PHST- 2011/09/20 00:00 [pmc-release] AID - PONE-D-11-11692 [pii] AID - 10.1371/journal.pone.0024918 [doi] PST - ppublish SO - PLoS One. 2011;6(9):e24918. doi: 10.1371/journal.pone.0024918. Epub 2011 Sep 20.