PMID- 22040742 OWN - NLM STAT- MEDLINE DCOM- 20120424 LR - 20230610 IS - 1876-7737 (Electronic) IS - 1874-3919 (Print) IS - 1874-3919 (Linking) VI - 75 IP - 3 DP - 2012 Jan 4 TI - Plasma membrane proteomes of differentially matured dendritic cells identified by LC-MS/MS combined with iTRAQ labelling. PG - 938-48 LID - 10.1016/j.jprot.2011.10.010 [doi] AB - Dendritic cells (DCs) play a pivotal role in polarising Th lymphocyte subsets but it is unclear what molecular events occur when DCs generate Th2-type responses. Here, we analysed plasma membrane-enriched fractions from immature, pro-Th1 and pro-Th2 DCs and used a combination of iTRAQ labelling and LC-MS/MS to quantify changes in the proteomes. Analysis was performed on triplicate biological samples and changes verified by flow cytometry. MHC class II molecules and CD29 were up-regulated in pro-Th1 DCs whilst CD18 and CD44 were up-regulated in pro-Th2 DCs. One of the most down-regulated molecules in pro-Th1 DCs was YM-1 whilst the greatest decrease in pro-Th2 DCs was NAP-22. Other molecules up-regulated in pro-Th2 DC compared to pro-Th1 DCs included some potentially involved in protein folding during antigen processing (clathrin and Rab-7), whilst other non-membrane proteins such as enzymes/transporters related to cell metabolism (malate dehydrogenase, pyruvate kinase, and ATPase Na(+)/K(+)) were also recorded. This suggests that pro-Th2 DCs are more metabolically active while pro-Th1 DCs have a mature 'end state'. Overall, although several molecules were preferentially expressed on pro-Th2 DCs, our proteomics data support the view of a 'limited maturation' of pro-Th2 DCs compared to pro-Th1 DCs. CI - Crown Copyright (c) 2011. Published by Elsevier B.V. All rights reserved. FAU - Ferret-Bernard, Stephanie AU - Ferret-Bernard S AD - Department of Biology, University of York, York, YO10 5DD, UK. FAU - Castro-Borges, William AU - Castro-Borges W FAU - Dowle, Adam A AU - Dowle AA FAU - Sanin, David E AU - Sanin DE FAU - Cook, Peter C AU - Cook PC FAU - Turner, Joseph D AU - Turner JD FAU - MacDonald, Andrew S AU - MacDonald AS FAU - Thomas, Jerry R AU - Thomas JR FAU - Mountford, Adrian P AU - Mountford AP LA - eng GR - G0701437/MRC_/Medical Research Council/United Kingdom GR - 071762/WT_/Wellcome Trust/United Kingdom GR - BBS/B/08531/BB_/Biotechnology and Biological Sciences Research Council/United Kingdom GR - 095831/WT_/Wellcome Trust/United Kingdom GR - WT_/Wellcome Trust/United Kingdom GR - 072255/WT_/Wellcome Trust/United Kingdom GR - BB/C516328/BB_/Biotechnology and Biological Sciences Research Council/United Kingdom PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20111025 PL - Netherlands TA - J Proteomics JT - Journal of proteomics JID - 101475056 RN - 0 (Membrane Proteins) RN - 0 (Proteome) SB - IM MH - Animals MH - Cell Differentiation/*physiology MH - Cell Membrane/immunology/*metabolism MH - Dendritic Cells/cytology/immunology/*metabolism MH - Female MH - Gene Expression Regulation/*physiology MH - Membrane Proteins/immunology/*metabolism MH - Mice MH - Proteome/immunology/*metabolism MH - Proteomics/methods MH - Th1 Cells/immunology/metabolism MH - Th2 Cells/immunology/metabolism PMC - PMC3444755 EDAT- 2011/11/02 06:00 MHDA- 2012/04/25 06:00 PMCR- 2012/01/04 CRDT- 2011/11/02 06:00 PHST- 2011/08/08 00:00 [received] PHST- 2011/10/07 00:00 [revised] PHST- 2011/10/17 00:00 [accepted] PHST- 2011/11/02 06:00 [entrez] PHST- 2011/11/02 06:00 [pubmed] PHST- 2012/04/25 06:00 [medline] PHST- 2012/01/04 00:00 [pmc-release] AID - S1874-3919(11)00496-9 [pii] AID - 10.1016/j.jprot.2011.10.010 [doi] PST - ppublish SO - J Proteomics. 2012 Jan 4;75(3):938-48. doi: 10.1016/j.jprot.2011.10.010. Epub 2011 Oct 25.