PMID- 22117552 OWN - NLM STAT- MEDLINE DCOM- 20120315 LR - 20131121 IS - 1608-3040 (Electronic) IS - 0006-2979 (Linking) VI - 76 IP - 11 DP - 2011 Nov TI - Characteristics of protection by MgADP and MgATP of alpha3beta3gamma subcomplex of thermophilic Bacillus PS3 betaY341W-mutant F1-ATPase from inhibition by 7-chloro-4-nitrobenz-2-oxa-1,3-diazole support a bi-site mechanism of catalysis. PG - 1253-61 LID - 10.1134/S0006297911110071 [doi] AB - MgADP and MgATP binding to catalytic sites of betaY341W-alpha(3)beta(3)gamma subcomplex of F(1)-ATPase from thermophilic Bacillus PS3 has been assessed using their effect on the enzyme inhibition by 7-chloro-4-nitrobenz-2-oxa-1,3-diazole (NBD-Cl). It was assumed that NBD-Cl can inhibit only when catalytic sites are empty, and inhibition is prevented if a catalytic site is occupied with a nucleotide. In the absence of an activator, MgADP and MgATP protect betaY341W-alpha(3)beta(3)gamma subcomplex from inhibition by NBD-Cl by binding to two catalytic sites with an affinity of 37 microM and 12 mM, and 46 microM and 15 mM, respectively. In the presence of an activator lauryldimethylamine-N-oxide (LDAO), MgADP protects betaY341W-alpha(3)beta(3)gamma subcomplex from inhibition by NBD-Cl by binding to a catalytic site with a K(d) of 12 mM. Nucleotide binding to a catalytic site with affinity in the millimolar range has not been previously revealed in the fluorescence quenching experiments with betaY341W-alpha(3)beta(3)gamma subcomplex. In the presence of activators LDAO or selenite, MgATP protects betaY341W-alpha(3)beta(3)gamma subcomplex from inhibition by NBD-Cl only partially, and the enzyme remains sensitive to inhibition by NBD-Cl even at MgATP concentrations that are saturating for ATPase activity. The results support a bi-site mechanism of catalysis by F(1)-ATPases. FAU - Milgrom, Y M AU - Milgrom YM AD - Department of Biochemistry and Molecular Biology, State University of New York, Upstate Medical University, Syracuse, New York 13210, USA. milgromy@upstate.edu LA - eng PT - Journal Article PL - United States TA - Biochemistry (Mosc) JT - Biochemistry. Biokhimiia JID - 0376536 RN - 0 (7-chloro-4-nitrobenz-2-oxa-1,3-diazole) RN - 0 (Dimethylamines) RN - 0 (Mutant Proteins) RN - 0 (Nitrobenzenes) RN - 0 (Oxazoles) RN - 0 (Protein Subunits) RN - 4F6FC4MI8W (dodecyldimethylamine oxide) RN - 61D2G4IYVH (Adenosine Diphosphate) RN - 8L70Q75FXE (Adenosine Triphosphate) RN - EC 3.6.1.- (Bacterial Proton-Translocating ATPases) SB - IM MH - Adenosine Diphosphate/*chemistry MH - Adenosine Triphosphate/*chemistry MH - Bacillus/*enzymology MH - Bacterial Proton-Translocating ATPases/antagonists & inhibitors/*chemistry MH - Binding Sites MH - Catalysis MH - Catalytic Domain MH - Dimethylamines/chemistry MH - Kinetics MH - Mutant Proteins/*chemistry/metabolism MH - Nitrobenzenes/chemistry MH - Oxazoles/chemistry MH - Protein Subunits/chemistry EDAT- 2011/11/29 06:00 MHDA- 2012/03/16 06:00 CRDT- 2011/11/29 06:00 PHST- 2011/11/29 06:00 [entrez] PHST- 2011/11/29 06:00 [pubmed] PHST- 2012/03/16 06:00 [medline] AID - BCM76111556 [pii] AID - 10.1134/S0006297911110071 [doi] PST - ppublish SO - Biochemistry (Mosc). 2011 Nov;76(11):1253-61. doi: 10.1134/S0006297911110071.