PMID- 22138717 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20211021 DP - 2010 TI - NANOSTRUCTURED PROBES FOR IN VIVO GENE DETECTION. PG - 143-165 AB - The ability to visualize in real-time the expression dynamics and localization of specific RNAs in vivo offers tremendous opportunities for biological and disease studies including cancer detection. However, quantitative methods such as real-time PCR and DNA microarrays rely on the use of cell lysates thus not able to obtain important spatial and temporal information. Fluorescence proteins and other reporter systems cannot image endogenous RNA in living cells. Fluorescence in situ hybridization (FISH) assays require washing to achieve specificity, therefore can only be used with fixed cells. Here we review the recent development of nanostructured probes for living cell RNA detection, and discuss the biological and engineering issues and challenges of quantifying gene expression in vivo. In particular, we describe methods that use oligonucleotide probes, combined with novel delivery strategies, to image the relative level, localization and dynamics of RNA in live cells. Examples of detecting endogenous mRNAs, as well as imaging their subcellular localization are given to illustrate the biological applications, and issues in probe design, delivery and target accessibility are discussed. The nanostructured probes promise to open new and exciting opportunities in sensitive gene detection for a wide range of biological and medical applications. FAU - Bao, Gang AU - Bao G FAU - Santangelo, Phillip AU - Santangelo P FAU - Nitin, Nitin AU - Nitin N FAU - Rhee, Won Jong AU - Rhee WJ LA - eng GR - PN2 EY018244/EY/NEI NIH HHS/United States GR - U01 HL080711-03/HL/NHLBI NIH HHS/United States GR - PN2 EY018244-03/EY/NEI NIH HHS/United States GR - U54 CA119338/CA/NCI NIH HHS/United States GR - U01 HL080711-04/HL/NHLBI NIH HHS/United States GR - PN2 EY018244-02/EY/NEI NIH HHS/United States GR - U01 HL080711/HL/NHLBI NIH HHS/United States GR - U54 CA119338-040002/CA/NCI NIH HHS/United States PT - Journal Article PL - England TA - Nanomedicine (Chichester) JT - Nanomedicine : design and applications of magnetic nanomaterials, nanosensors, and nanosystems JID - 101480046 PMC - PMC3226718 MID - NIHMS132479 EDAT- 2010/01/01 00:00 MHDA- 2010/01/01 00:01 PMCR- 2011/11/30 CRDT- 2011/12/06 06:00 PHST- 2011/12/06 06:00 [entrez] PHST- 2010/01/01 00:00 [pubmed] PHST- 2010/01/01 00:01 [medline] PHST- 2011/11/30 00:00 [pmc-release] AID - 10.1002/9783527628155.nanotech054 [doi] PST - ppublish SO - Nanomedicine (Chichester). 2010:143-165. doi: 10.1002/9783527628155.nanotech054.