PMID- 22223479 OWN - NLM STAT- MEDLINE DCOM- 20121220 LR - 20181201 IS - 1536-4844 (Electronic) IS - 1078-0998 (Linking) VI - 18 IP - 8 DP - 2012 Aug TI - Genes associated with intestinal permeability in ulcerative colitis: changes in expression following infliximab therapy. PG - 1399-410 LID - 10.1002/ibd.22853 [doi] AB - BACKGROUND: Alterations in intestinal permeability have been implicated in ulcerative colitis (UC). Infliximab, a monoclonal anti-tumor necrosis factor alpha (TNFalpha) antibody, can induce clinical response in UC. Gene expression in colonic biopsies taken from responders and nonresponders to infliximab can provide insight into the mechanisms of the altered intestinal permeability at a molecular level. METHODS: Colonic biopsies (n = 18 anti-TNFalpha naive UC patients; n = 8 normal controls; n = 80 Active Ulcerative Colitis Trial [ACT] 1 patients) were analyzed for mRNA expression using gene expression microarrays. Computational reverse causal reasoning was applied to build causal network models of UC and response and nonresponse of UC to treatment. Quantitative reverse-transcription polymerase chain reaction (qPCR) was used to confirm differentially expressed genes. RESULTS: Reverse causal reasoning on mRNA expression data from anti-TNFalpha-naive UC and normal samples provided a mechanistic disease model of the biology of gene expression observed in UC. mRNA expression data from the ACT 1 study enabled construction of a mechanistic model describing the biology of nonresponders to infliximab, including evidence for increased intestinal permeability compared with normal and responder samples. Gene expression changes identified as central to intestinal permeability dysregulation were confirmed in normal, UC, and infliximab-treated patients by qPCR analysis. Gene expression returned toward normal levels in infliximab responders, but not in nonresponders. CONCLUSION: Gene expression analysis and causal network modeling in combination showed that aberrant mRNA expression of genes involved in intestinal epithelial permeability for infliximab responders was restored toward levels observed in normal samples. Infliximab nonresponders showed no equivalent restoration in the expression of these genes. CI - Copyright (c) 2012 Crohn's & Colitis Foundation of America, Inc. FAU - Toedter, Gary AU - Toedter G AD - Biomarkers, Centocor Research & Development, Malvern, Pennsylvania, USA. gtoedter@its.jnj.com FAU - Li, Katherine AU - Li K FAU - Sague, Sarah AU - Sague S FAU - Ma, Keying AU - Ma K FAU - Marano, Colleen AU - Marano C FAU - Macoritto, Michael AU - Macoritto M FAU - Park, Jennifer AU - Park J FAU - Deehan, Renee AU - Deehan R FAU - Matthews, Andrea AU - Matthews A FAU - Wu, Gary D AU - Wu GD FAU - Lewis, James D AU - Lewis JD FAU - Arijs, Ingrid AU - Arijs I FAU - Rutgeerts, Paul AU - Rutgeerts P FAU - Baribaud, Frederic AU - Baribaud F LA - eng PT - Comparative Study PT - Journal Article PT - Randomized Controlled Trial PT - Research Support, Non-U.S. Gov't DEP - 20120104 PL - England TA - Inflamm Bowel Dis JT - Inflammatory bowel diseases JID - 9508162 RN - 0 (Antibodies, Monoclonal) RN - 0 (Biomarkers) RN - 0 (Gastrointestinal Agents) RN - 0 (RNA, Messenger) RN - 0 (Tumor Necrosis Factor-alpha) RN - B72HH48FLU (Infliximab) SB - IM MH - Adult MH - Antibodies, Monoclonal/*therapeutic use MH - Biomarkers/*metabolism MH - Case-Control Studies MH - Cell Membrane Permeability/*drug effects MH - Colitis, Ulcerative/*drug therapy/*genetics MH - Drug Resistance/genetics MH - Female MH - Gastrointestinal Agents/*therapeutic use MH - Gene Expression Profiling MH - Humans MH - Infliximab MH - Intestinal Mucosa/metabolism MH - Intestines/*drug effects MH - Male MH - Middle Aged MH - Oligonucleotide Array Sequence Analysis MH - RNA, Messenger/genetics MH - Reverse Transcriptase Polymerase Chain Reaction MH - Tumor Necrosis Factor-alpha/antagonists & inhibitors EDAT- 2012/01/10 06:00 MHDA- 2012/12/21 06:00 CRDT- 2012/01/07 06:00 PHST- 2011/11/10 00:00 [received] PHST- 2011/11/15 00:00 [accepted] PHST- 2012/01/07 06:00 [entrez] PHST- 2012/01/10 06:00 [pubmed] PHST- 2012/12/21 06:00 [medline] AID - 10.1002/ibd.22853 [doi] PST - ppublish SO - Inflamm Bowel Dis. 2012 Aug;18(8):1399-410. doi: 10.1002/ibd.22853. Epub 2012 Jan 4.