PMID- 22231286 OWN - NLM STAT- MEDLINE DCOM- 20120917 LR - 20211021 IS - 1572-8781 (Electronic) IS - 1387-2176 (Print) IS - 1387-2176 (Linking) VI - 14 IP - 3 DP - 2012 Jun TI - Microfluidic extraction and stretching of chromosomal DNA from single cell nuclei for DNA fluorescence in situ hybridization. PG - 443-51 LID - 10.1007/s10544-011-9621-8 [doi] AB - We have developed a novel method for genetic characterization of single cells by integrating microfluidic stretching of chromosomal DNA and fiber fluorescence in situ hybridization (FISH). In this method, individually isolated cell nuclei were immobilized in a microchannel. Chromosomal DNA was released from the nuclei and stretched by a pressure-driven flow. We analyzed and optimized flow conditions to generate a millimeter-long band of stretched DNA from each nucleus. Telomere fiber FISH was successfully performed on the stretched chromosomal DNA. Individual telomere fiber FISH signals from single cells could be resolved and their lengths measured, demonstrating the ability of the method to quantify genetic features at the level of single cells. FAU - Wang, Xiaozhu AU - Wang X AD - Department of Chemical and Biomedical Engineering, FAMU-FSU College of Engineering, Florida State University, 2525 Pottsdamer Street, Tallahassee, FL 32310, USA. FAU - Takebayashi, Shin-Ichiro AU - Takebayashi S FAU - Bernardin, Evans AU - Bernardin E FAU - Gilbert, David M AU - Gilbert DM FAU - Chella, Ravindran AU - Chella R FAU - Guan, Jingjiao AU - Guan J LA - eng GR - P01 GM085354/GM/NIGMS NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't PL - United States TA - Biomed Microdevices JT - Biomedical microdevices JID - 100887374 RN - 9007-49-2 (DNA) SB - IM MH - Animals MH - Cell Nucleus/genetics MH - Chromosomes, Mammalian MH - DNA/genetics/*isolation & purification MH - Embryonic Stem Cells/cytology MH - In Situ Hybridization, Fluorescence/*methods MH - Mice MH - Microfluidic Analytical Techniques/methods MH - Microfluidics/*instrumentation/*methods MH - Telomere/genetics/metabolism PMC - PMC3425352 MID - NIHMS397175 EDAT- 2012/01/11 06:00 MHDA- 2012/09/18 06:00 PMCR- 2012/08/22 CRDT- 2012/01/11 06:00 PHST- 2012/01/11 06:00 [entrez] PHST- 2012/01/11 06:00 [pubmed] PHST- 2012/09/18 06:00 [medline] PHST- 2012/08/22 00:00 [pmc-release] AID - 10.1007/s10544-011-9621-8 [doi] PST - ppublish SO - Biomed Microdevices. 2012 Jun;14(3):443-51. doi: 10.1007/s10544-011-9621-8.