PMID- 22282074 OWN - NLM STAT- MEDLINE DCOM- 20121119 LR - 20211021 IS - 1097-0142 (Electronic) IS - 0008-543X (Print) IS - 0008-543X (Linking) VI - 118 IP - 18 DP - 2012 Sep 15 TI - Correlations between the percentage of tumor cells showing an anaplastic lymphoma kinase (ALK) gene rearrangement, ALK signal copy number, and response to crizotinib therapy in ALK fluorescence in situ hybridization-positive nonsmall cell lung cancer. PG - 4486-94 LID - 10.1002/cncr.27411 [doi] AB - BACKGROUND: Fluorescence in situ hybridization (FISH), using break-apart red (3') and green (5') ALK (anaplastic lymphoma kinase) probes, consistently shows rearrangements in <100% of tumor cells in ALK-positive (ALK+) nonsmall cell lung cancer (NSCLC). Increased copy numbers of fused and rearranged signals also occur. Here, correlations are explored between the percentage of ALK+ cells and signal copy number and their association with response to ALK inhibition. METHODS: Ninety ALK+ NSCLC cases were evaluated. The percentage of positive cells, pattern of positivity (split, single red, or both), and copy number of fused, isolated red and green signals were recorded. Thirty patients had received crizotinib. RESULTS: Increased isolated red signal copy number (contributing to both single red and split patterns of positivity) correlated with a higher percentage of ALK+ cells (r = 0.743, P < .0001). Mean fused copy number was negatively associated with isolated red signal copy number (r = -0.409, P < .0001). Neither percentage of positive cells (r = 0.192, P = .3), nor copy number of isolated red signal (r = 0.274, P = .195) correlated with maximal tumor shrinkage with crizotinib. CONCLUSIONS: The strong association between increased copy number of key ALK signals and percentage of positive cells suggests that the <100% rate of cellular positivity in ALK+ tumors is due to technical factors, not biological factors. In ALK+ tumors, neither the percentage of positive cells nor signal copy number appear to be informative variables for predicting benefit from ALK inhibition. The inverse relationship between fused and isolated red copy number suggests ALK+ may be a distinct "near-diploid" subtype of NSCLC that develops before significant chromosomal aneusomy occurs. CI - Copyright (c) 2012 American Cancer Society. FAU - Camidge, D Ross AU - Camidge DR AD - University of Colorado School of Medicine, Anschutz Medical Campus, Aurora, CO, USA. ross.camidge@ucdenver.edu FAU - Theodoro, Mariana AU - Theodoro M FAU - Maxson, Delee A AU - Maxson DA FAU - Skokan, Margaret AU - Skokan M FAU - O'Brien, Tara AU - O'Brien T FAU - Lu, Xian AU - Lu X FAU - Doebele, Robert C AU - Doebele RC FAU - Baron, Anna E AU - Baron AE FAU - Varella-Garcia, Marileila AU - Varella-Garcia M LA - eng GR - P30 CA046934/CA/NCI NIH HHS/United States GR - P50 CA058187/CA/NCI NIH HHS/United States GR - P50 CA058187-18/CA/NCI NIH HHS/United States GR - P50CA58187/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural DEP - 20120126 PL - United States TA - Cancer JT - Cancer JID - 0374236 RN - 0 (Antineoplastic Agents) RN - 0 (Protein Kinase Inhibitors) RN - 0 (Pyrazoles) RN - 0 (Pyridines) RN - 53AH36668S (Crizotinib) RN - EC 2.7.10.1 (ALK protein, human) RN - EC 2.7.10.1 (Anaplastic Lymphoma Kinase) RN - EC 2.7.10.1 (Receptor Protein-Tyrosine Kinases) SB - IM MH - Anaplastic Lymphoma Kinase MH - Antineoplastic Agents/*therapeutic use MH - Carcinoma, Non-Small-Cell Lung/drug therapy/enzymology/*genetics MH - Crizotinib MH - DNA Copy Number Variations MH - Female MH - Gene Rearrangement MH - Humans MH - In Situ Hybridization, Fluorescence MH - Lung Neoplasms/drug therapy/enzymology/*genetics MH - Male MH - Protein Kinase Inhibitors/*therapeutic use MH - Pyrazoles/*therapeutic use MH - Pyridines/*therapeutic use MH - Receptor Protein-Tyrosine Kinases/*genetics PMC - PMC3342464 MID - NIHMS344888 EDAT- 2012/01/28 06:00 MHDA- 2012/12/10 06:00 PMCR- 2013/09/15 CRDT- 2012/01/28 06:00 PHST- 2011/08/03 00:00 [received] PHST- 2011/09/14 00:00 [revised] PHST- 2011/09/19 00:00 [accepted] PHST- 2012/01/28 06:00 [entrez] PHST- 2012/01/28 06:00 [pubmed] PHST- 2012/12/10 06:00 [medline] PHST- 2013/09/15 00:00 [pmc-release] AID - 10.1002/cncr.27411 [doi] PST - ppublish SO - Cancer. 2012 Sep 15;118(18):4486-94. doi: 10.1002/cncr.27411. Epub 2012 Jan 26.