PMID- 22458515 OWN - NLM STAT- MEDLINE DCOM- 20120920 LR - 20211021 IS - 1474-760X (Electronic) IS - 1474-7596 (Print) IS - 1474-7596 (Linking) VI - 13 IP - 3 DP - 2012 TI - The transcription factor encyclopedia. PG - R24 LID - 10.1186/gb-2012-13-3-r24 [doi] AB - Here we present the Transcription Factor Encyclopedia (TFe), a new web-based compendium of mini review articles on transcription factors (TFs) that is founded on the principles of open access and collaboration. Our consortium of over 100 researchers has collectively contributed over 130 mini review articles on pertinent human, mouse and rat TFs. Notable features of the TFe website include a high-quality PDF generator and web API for programmatic data retrieval. TFe aims to rapidly educate scientists about the TFs they encounter through the delivery of succinct summaries written and vetted by experts in the field. TFe is available at http://www.cisreg.ca/tfe. FAU - Yusuf, Dimas AU - Yusuf D AD - Department of Medical Genetics, Faculty of Medicine, Centre for Molecular Medicine and Therapeutics, Child and Family Research Institute, University of British Columbia, Vancouver, Canada. FAU - Butland, Stefanie L AU - Butland SL FAU - Swanson, Magdalena I AU - Swanson MI FAU - Bolotin, Eugene AU - Bolotin E FAU - Ticoll, Amy AU - Ticoll A FAU - Cheung, Warren A AU - Cheung WA FAU - Zhang, Xiao Yu Cindy AU - Zhang XY FAU - Dickman, Christopher T D AU - Dickman CT FAU - Fulton, Debra L AU - Fulton DL FAU - Lim, Jonathan S AU - Lim JS FAU - Schnabl, Jake M AU - Schnabl JM FAU - Ramos, Oscar H P AU - Ramos OH FAU - Vasseur-Cognet, Mireille AU - Vasseur-Cognet M FAU - de Leeuw, Charles N AU - de Leeuw CN FAU - Simpson, Elizabeth M AU - Simpson EM FAU - Ryffel, Gerhart U AU - Ryffel GU FAU - Lam, Eric W-F AU - Lam EW FAU - Kist, Ralf AU - Kist R FAU - Wilson, Miranda S C AU - Wilson MS FAU - Marco-Ferreres, Raquel AU - Marco-Ferreres R FAU - Brosens, Jan J AU - Brosens JJ FAU - Beccari, Leonardo L AU - Beccari LL FAU - Bovolenta, Paola AU - Bovolenta P FAU - Benayoun, Berenice A AU - Benayoun BA FAU - Monteiro, Lara J AU - Monteiro LJ FAU - Schwenen, Helma D C AU - Schwenen HD FAU - Grontved, Lars AU - Grontved L FAU - Wederell, Elizabeth AU - Wederell E FAU - Mandrup, Susanne AU - Mandrup S FAU - Veitia, Reiner A AU - Veitia RA FAU - Chakravarthy, Harini AU - Chakravarthy H FAU - Hoodless, Pamela A AU - Hoodless PA FAU - Mancarelli, M Michela AU - Mancarelli MM FAU - Torbett, Bruce E AU - Torbett BE FAU - Banham, Alison H AU - Banham AH FAU - Reddy, Sekhar P AU - Reddy SP FAU - Cullum, Rebecca L AU - Cullum RL FAU - Liedtke, Michaela AU - Liedtke M FAU - Tschan, Mario P AU - Tschan MP FAU - Vaz, Michelle AU - Vaz M FAU - Rizzino, Angie AU - Rizzino A FAU - Zannini, Mariastella AU - Zannini M FAU - Frietze, Seth AU - Frietze S FAU - Farnham, Peggy J AU - Farnham PJ FAU - Eijkelenboom, Astrid AU - Eijkelenboom A FAU - Brown, Philip J AU - Brown PJ FAU - Laperriere, David AU - Laperriere D FAU - Leprince, Dominique AU - Leprince D FAU - de Cristofaro, Tiziana AU - de Cristofaro T FAU - Prince, Kelly L AU - Prince KL FAU - Putker, Marrit AU - Putker M FAU - del Peso, Luis AU - del Peso L FAU - Camenisch, Gieri AU - Camenisch G FAU - Wenger, Roland H AU - Wenger RH FAU - Mikula, Michal AU - Mikula M FAU - Rozendaal, Marieke AU - Rozendaal M FAU - Mader, Sylvie AU - Mader S FAU - Ostrowski, Jerzy AU - Ostrowski J FAU - Rhodes, Simon J AU - Rhodes SJ FAU - Van Rechem, Capucine AU - Van Rechem C FAU - Boulay, Gaylor AU - Boulay G FAU - Olechnowicz, Sam W Z AU - Olechnowicz SW FAU - Breslin, Mary B AU - Breslin MB FAU - Lan, Michael S AU - Lan MS FAU - Nanan, Kyster K AU - Nanan KK FAU - Wegner, Michael AU - Wegner M FAU - Hou, Juan AU - Hou J FAU - Mullen, Rachel D AU - Mullen RD FAU - Colvin, Stephanie C AU - Colvin SC FAU - Noy, Peter John AU - Noy PJ FAU - Webb, Carol F AU - Webb CF FAU - Witek, Matthew E AU - Witek ME FAU - Ferrell, Scott AU - Ferrell S FAU - Daniel, Juliet M AU - Daniel JM FAU - Park, Jason AU - Park J FAU - Waldman, Scott A AU - Waldman SA FAU - Peet, Daniel J AU - Peet DJ FAU - Taggart, Michael AU - Taggart M FAU - Jayaraman, Padma-Sheela AU - Jayaraman PS FAU - Karrich, Julien J AU - Karrich JJ FAU - Blom, Bianca AU - Blom B FAU - Vesuna, Farhad AU - Vesuna F FAU - O'Geen, Henriette AU - O'Geen H FAU - Sun, Yunfu AU - Sun Y FAU - Gronostajski, Richard M AU - Gronostajski RM FAU - Woodcroft, Mark W AU - Woodcroft MW FAU - Hough, Margaret R AU - Hough MR FAU - Chen, Edwin AU - Chen E FAU - Europe-Finner, G Nicholas AU - Europe-Finner GN FAU - Karolczak-Bayatti, Magdalena AU - Karolczak-Bayatti M FAU - Bailey, Jarrod AU - Bailey J FAU - Hankinson, Oliver AU - Hankinson O FAU - Raman, Venu AU - Raman V FAU - LeBrun, David P AU - LeBrun DP FAU - Biswal, Shyam AU - Biswal S FAU - Harvey, Christopher J AU - Harvey CJ FAU - DeBruyne, Jason P AU - DeBruyne JP FAU - Hogenesch, John B AU - Hogenesch JB FAU - Hevner, Robert F AU - Hevner RF FAU - Heligon, Christophe AU - Heligon C FAU - Luo, Xin M AU - Luo XM FAU - Blank, Marissa Cathleen AU - Blank MC FAU - Millen, Kathleen Joyce AU - Millen KJ FAU - Sharlin, David S AU - Sharlin DS FAU - Forrest, Douglas AU - Forrest D FAU - Dahlman-Wright, Karin AU - Dahlman-Wright K FAU - Zhao, Chunyan AU - Zhao C FAU - Mishima, Yuriko AU - Mishima Y FAU - Sinha, Satrajit AU - Sinha S FAU - Chakrabarti, Rumela AU - Chakrabarti R FAU - Portales-Casamar, Elodie AU - Portales-Casamar E FAU - Sladek, Frances M AU - Sladek FM FAU - Bradley, Philip H AU - Bradley PH FAU - Wasserman, Wyeth W AU - Wasserman WW LA - eng GR - R01 DK053892/DK/NIDDK NIH HHS/United States GR - CA146033/CA/NCI NIH HHS/United States GR - BHF_/British Heart Foundation/United Kingdom GR - R01-AI080564-01/AI/NIAID NIH HHS/United States GR - R01 MH058869/MH/NIMH NIH HHS/United States GR - MOP 13-147/CAPMC/CIHR/Canada GR - MOP-89806/CAPMC/CIHR/Canada GR - HL091219/HL/NHLBI NIH HHS/United States GR - U01 ES017154/ES/NIEHS NIH HHS/United States GR - GM079239/GM/NIGMS NIH HHS/United States GR - R01GM088277-01/GM/NIGMS NIH HHS/United States GR - ES11893/ES/NIEHS NIH HHS/United States GR - R01CA28868/CA/NCI NIH HHS/United States GR - T32GM007183/GM/NIGMS NIH HHS/United States GR - WT_/Wellcome Trust/United Kingdom GR - CA75123/CA/NCI NIH HHS/United States GR - P50ES015903/ES/NIEHS NIH HHS/United States GR - GM007377/GM/NIGMS NIH HHS/United States GR - ES11863/ES/NIEHS NIH HHS/United States GR - 12011/CRUK_/Cancer Research UK/United Kingdom GR - R21 MH087397/MH/NIMH NIH HHS/United States GR - CA45250/CA/NCI NIH HHS/United States GR - ES07141/ES/NIEHS NIH HHS/United States GR - ES018998/ES/NIEHS NIH HHS/United States GR - R01 GM088277/GM/NIGMS NIH HHS/United States GR - HD42024/HD/NICHD NIH HHS/United States GR - K08 CA120349/CA/NCI NIH HHS/United States GR - 1U54HG004558/HG/NHGRI NIH HHS/United States GR - F32HD068113/HD/NICHD NIH HHS/United States GR - R01GM084875/GM/NIGMS NIH HHS/United States GR - 044215/PHS HHS/United States GR - R01 GM084875/GM/NIGMS NIH HHS/United States GR - MOP-84320/CAPMC/CIHR/Canada GR - R24 EY017540/EY/NEI NIH HHS/United States GR - 5R01CA097226-03/CA/NCI NIH HHS/United States GR - P50HL084945/HL/NHLBI NIH HHS/United States GR - G0800202/MRC_/Medical Research Council/United Kingdom GR - HL081205/HL/NHLBI NIH HHS/United States GR - R01 HD42024/HD/NICHD NIH HHS/United States GR - R01NS044262/NS/NINDS NIH HHS/United States GR - P30 ES003819/ES/NIEHS NIH HHS/United States GR - HL66109/HL/NHLBI NIH HHS/United States GR - CA95026/CA/NCI NIH HHS/United States GR - R01DK061436/DK/NIDDK NIH HHS/United States GR - R01GM069417/GM/NIGMS NIH HHS/United States GR - R01 NS072441/NS/NINDS NIH HHS/United States GR - R01NS050386/NS/NINDS NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't PL - England TA - Genome Biol JT - Genome biology JID - 100960660 RN - 0 (Transcription Factors) SB - IM MH - Access to Information MH - Animals MH - *Computational Biology MH - Databases, Protein/*supply & distribution MH - Encyclopedias as Topic MH - Humans MH - Internet MH - Mice MH - Rats MH - Transcription Factors/*genetics MH - Transcription, Genetic PMC - PMC3439975 EDAT- 2012/03/31 06:00 MHDA- 2012/09/21 06:00 PMCR- 2012/03/29 CRDT- 2012/03/31 06:00 PHST- 2012/02/02 00:00 [received] PHST- 2012/03/19 00:00 [revised] PHST- 2012/03/29 00:00 [accepted] PHST- 2012/03/31 06:00 [entrez] PHST- 2012/03/31 06:00 [pubmed] PHST- 2012/09/21 06:00 [medline] PHST- 2012/03/29 00:00 [pmc-release] AID - gb-2012-13-3-r24 [pii] AID - 10.1186/gb-2012-13-3-r24 [doi] PST - ppublish SO - Genome Biol. 2012;13(3):R24. doi: 10.1186/gb-2012-13-3-r24.