PMID- 22533991 OWN - NLM STAT- MEDLINE DCOM- 20130117 LR - 20220317 IS - 1471-2407 (Electronic) IS - 1471-2407 (Linking) VI - 12 DP - 2012 Apr 25 TI - Carnitine palmitoyltransferase 1A (CPT1A): a transcriptional target of PAX3-FKHR and mediates PAX3-FKHR-dependent motility in alveolar rhabdomyosarcoma cells. PG - 154 AB - BACKGROUND: Alveolar rhabdomyosarcoma (ARMS) has a high propensity to metastasize, leading to its aggressiveness and a poor survival rate among those with the disease. More than 80% of aggressive ARMSs harbor a PAX3-FKHR fusion transcription factor, which regulates cell migration and promotes metastasis, most likely by regulating the fusion protein's transcriptional targets. Therefore, identifying druggable transcription targets of PAX3-FKHR that are also downstream effectors of PAX3-FKHR-mediated cell migration and metastasis may lead to novel therapeutic approaches for treating ARMS. METHODS: To identify genes whose expression is directly affected by the level of PAX3-FKHR in an ARMS cellular-context, we first developed an ARMS cell line in which PAX3-FKHR is stably down-regulated, and showed that stably downregulating PAX3-FKHR in ARMS cells significantly decreased the cells' motility. We used microarray analysis to identify genes whose expression level decreased when PAX3-FKHR was downregulated. We used mutational analysis, promoter reporter assays, and electrophoretic mobility shift assays to determine whether PAX3-FKHR binds to the promoter region of the target gene. We used siRNA and pharmacologic inhibitor to downregulate the target gene of PAX3-FKHR and investigated the effect of such downregulation on cell motility. RESULTS: We found that when PAX3-FKHR was downregulated, the expression of carnitine palmitoyltransferase 1A (CPT1A) decreased. We showed that PAX3-FKHR binds to a paired-domain binding-site in the CPT1A promoter region, indicating that CPT1A is a novel transcriptional target of PAX3-FKHR. Furthermore, downregulating CPT1A decreased cell motility in ARMS cells, indicating that CPT1A is a downstream effector of PAX3-FKHR-mediated cell migration and metastasis. CONCLUSIONS: Taken together, we have identified CPT1A as a novel transcriptional target of PAX3-FKHR and revealed the novel function of CPT1A in promoting cell motility. CPT1A may represent a novel therapeutic target for the treatment of ARMS. FAU - Liu, Lingling AU - Liu L AD - Department of Chemical Biology and Therapeutics, St, Jude Children's Research Hospital, Memphis, TN 38105, USA. FAU - Wang, Yong-Dong AU - Wang YD FAU - Wu, Jing AU - Wu J FAU - Cui, Jimmy AU - Cui J FAU - Chen, Taosheng AU - Chen T LA - eng GR - P30 CA021765/CA/NCI NIH HHS/United States GR - P30CA027165/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't DEP - 20120425 PL - England TA - BMC Cancer JT - BMC cancer JID - 100967800 RN - 0 (Oncogene Proteins, Fusion) RN - 0 (PAX3-FKHR fusion protein, human) RN - 0 (Paired Box Transcription Factors) RN - EC 2.3.1.21 (CPT1A protein, human) RN - EC 2.3.1.21 (Carnitine O-Palmitoyltransferase) SB - IM MH - Binding Sites MH - Carnitine O-Palmitoyltransferase/*genetics MH - Cell Line, Tumor MH - Cell Movement/*genetics MH - Down-Regulation/genetics MH - *Gene Expression Regulation, Neoplastic MH - Humans MH - Oncogene Proteins, Fusion/genetics/*metabolism MH - Paired Box Transcription Factors/metabolism MH - Response Elements MH - Rhabdomyosarcoma, Alveolar/*genetics/*metabolism MH - *Transcription, Genetic MH - Transcriptional Activation PMC - PMC3453510 EDAT- 2012/04/27 06:00 MHDA- 2013/01/18 06:00 PMCR- 2012/04/25 CRDT- 2012/04/27 06:00 PHST- 2011/10/17 00:00 [received] PHST- 2012/04/25 00:00 [accepted] PHST- 2012/04/27 06:00 [entrez] PHST- 2012/04/27 06:00 [pubmed] PHST- 2013/01/18 06:00 [medline] PHST- 2012/04/25 00:00 [pmc-release] AID - 1471-2407-12-154 [pii] AID - 10.1186/1471-2407-12-154 [doi] PST - epublish SO - BMC Cancer. 2012 Apr 25;12:154. doi: 10.1186/1471-2407-12-154.