PMID- 23230424 OWN - NLM STAT- PubMed-not-MEDLINE DCOM- 20121212 LR - 20211021 IS - 1664-042X (Electronic) IS - 1664-042X (Linking) VI - 3 DP - 2012 TI - Double-negative feedback between S-phase cyclin-CDK and CKI generates abruptness in the G1/S switch. PG - 459 LID - 10.3389/fphys.2012.00459 [doi] LID - 459 AB - The G1/S transition is a crucial decision point in the cell cycle. At G1/S, there is an abrupt switch from a state of high cyclin-dependent kinases (CDK) inhibitor (CKI) levels and low S-phase CDK activity to a state of high S-phase CDK activity and degraded CKI. In budding yeast, this transition is triggered by phosphorylation of the Cdk1 inhibitor Sic1 at multiple sites by G1-phase CDK (Cln1,2-Cdk1) and S-phase CDK (Clb5,6-Cdk1) complexes. Using mathematical modeling we demonstrate that the mechanistic basis for the abruptness of the G1/S transition is the highly specific phosphorylation of Sic1 by S-phase CDK complex. This switch is generated by a double-negative feedback loop in which S-CDK1 phosphorylates Sic1, thus targeting it for destruction, and thereby liberating further S-CDK1 from the inhibitory Sic1-S-CDK1 complex. Our model predicts that the abruptness of the switch depends upon a strong binding affinity within the Sic1-S-CDK inhibitory complex. In vitro phosphorylation analysis using purified yeast proteins revealed that free Clb5-Cdk1 can create positive feedback by phosphorylating Sic1 that is bound in the inhibitory complex, and that Sic1 inhibits Clb5-Cdk1 with a sub-nanomolar inhibition constant. Our model also predicts that if the G1-phase CDK complex is too efficient at targeting Sic1 for destruction, then G1/S becomes a smooth and readily reversible transition. We propose that the optimal role for the G1-phase CDK in the switch would not be to act as a kinase activity directly responsible for abrupt degradation of CKI, but rather to act as a priming signal that initiates a positive feedback loop driven by emerging free S-phase CDK. FAU - Venta, Rainis AU - Venta R AD - Institute of Technology, University of Tartu Tartu, Estonia. FAU - Valk, Ervin AU - Valk E FAU - Koivomagi, Mardo AU - Koivomagi M FAU - Loog, Mart AU - Loog M LA - eng PT - Journal Article DEP - 20121206 PL - Switzerland TA - Front Physiol JT - Frontiers in physiology JID - 101549006 PMC - PMC3515773 OTO - NOTNLM OT - CDK OT - CKI OT - Cdk1 OT - G1/S OT - Sic1 OT - cell cycle OT - cyclin-dependent kinases OT - switch EDAT- 2012/12/12 06:00 MHDA- 2012/12/12 06:01 PMCR- 2012/12/06 CRDT- 2012/12/12 06:00 PHST- 2012/10/04 00:00 [received] PHST- 2012/11/19 00:00 [accepted] PHST- 2012/12/12 06:00 [entrez] PHST- 2012/12/12 06:00 [pubmed] PHST- 2012/12/12 06:01 [medline] PHST- 2012/12/06 00:00 [pmc-release] AID - 10.3389/fphys.2012.00459 [doi] PST - epublish SO - Front Physiol. 2012 Dec 6;3:459. doi: 10.3389/fphys.2012.00459. eCollection 2012.