PMID- 23508550
OWN - NLM
STAT- MEDLINE
DCOM- 20130930
LR  - 20130726
IS  - 1432-8798 (Electronic)
IS  - 0304-8608 (Linking)
VI  - 158
IP  - 8
DP  - 2013 Aug
TI  - Complete nucleotide sequence of a new isolate of passion fruit woodiness virus 
      from Western Australia.
PG  - 1821-4
LID - 10.1007/s00705-013-1670-2 [doi]
AB  - We determined the complete genome sequence of the passion fruit woodiness virus 
      Gld-1 isolate (PWV-Gld-1) from Australia and compared it with that of PWV-MU-2, 
      another Australian isolate of PWV. The genomes shared high sequence identity in 
      both the complete nucleotide sequence and the ORF amino acid sequence. All of the 
      cleavage sites of each protein were identical to those of MU-2, and the sequence 
      identity for the individual proteins ranged from 97.2 % to 100.0 %. However, the 
      5' untranslated region (5'UTR) of the Gld-1 isolate shared only 46.8 % sequence 
      identity with that of PWV-MU-2 and was 177 nucleotides shorter. Re-sequencing of 
      the 5'UTR of MU-2 revealed that the 5' end of the original sequence includes an 
      artifact generated by deep sequencing.
FAU - Fukumoto, Tomohiro
AU  - Fukumoto T
AD  - Faculty of Agriculture, Kagoshima University, Korimoto 1-21-24, 890-0065, 
      Kagoshima, Japan.
FAU - Nakamura, Masayuki
AU  - Nakamura M
FAU - Wylie, Stephen J
AU  - Wylie SJ
FAU - Chiaki, Yuya
AU  - Chiaki Y
FAU - Iwai, Hisashi
AU  - Iwai H
LA  - eng
SI  - GENBANK/HQ122652
PT  - Journal Article
DEP - 20130319
PL  - Austria
TA  - Arch Virol
JT  - Archives of virology
JID - 7506870
RN  - 0 (RNA, Viral)
SB  - IM
MH  - Cluster Analysis
MH  - *Genome, Viral
MH  - Molecular Sequence Data
MH  - Phylogeny
MH  - Plant Diseases/virology
MH  - Potyvirus/*genetics/isolation & purification
MH  - RNA, Viral/*genetics
MH  - *Sequence Analysis, DNA
MH  - Sequence Homology
MH  - Western Australia
EDAT- 2013/03/20 06:00
MHDA- 2013/10/01 06:00
CRDT- 2013/03/20 06:00
PHST- 2012/12/26 00:00 [received]
PHST- 2013/02/07 00:00 [accepted]
PHST- 2013/03/20 06:00 [entrez]
PHST- 2013/03/20 06:00 [pubmed]
PHST- 2013/10/01 06:00 [medline]
AID - 10.1007/s00705-013-1670-2 [doi]
PST - ppublish
SO  - Arch Virol. 2013 Aug;158(8):1821-4. doi: 10.1007/s00705-013-1670-2. Epub 2013 Mar 
      19.