PMID- 23849069
OWN - NLM
STAT- MEDLINE
DCOM- 20140127
LR  - 20130715
IS  - 1399-0039 (Electronic)
IS  - 0001-2815 (Linking)
VI  - 82
IP  - 2
DP  - 2013 Aug
TI  - Identification of three novel human leukocyte antigen alleles, HLA-B*58:43, 
      HLA-C*03:190, and HLA-DPA1*01:12, in an East African cohort.
PG  - 131-3
LID - 10.1111/tan.12157 [doi]
AB  - Three novel human leukocyte antigen (HLA) alleles were identified using a 
      sequence-based typing of HLA class I and class II alleles of 1867 participants 
      from a male circumcision cohort in Kenya. The new alleles were first identified 
      by sequencing and then confirmed by cloning the polymerase chain reaction (PCR) 
      products and sequencing multiple clones. HLA-B*58:43 was identical to HLA-B*58:02 
      with the exception of a nucleotide change at codon 125 in exon 3 (GCC-->ACC), and 
      resulted in the amino acid change from Alanine to Threonine. HLA-C*03:190 was 
      identical to HLA-C*03:02:01 with the exception of a nucleotide change at codon 
      131 in exon 3 (CGC-->TGC), and resulted in the amino acid change from Arginine to 
      Cysteine. HLA-DPA1*01:12 was identical to HLA-DPA1*01:03:01:01 with the exception 
      of a nucleotide change at codon 66 in exon 2 (TTG-->TCG), and resulted in the amino 
      acid change from Leucine to Serine.
CI  - (c) 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.
FAU - Nykoluk, M
AU  - Nykoluk M
AD  - HIV and Human Genetics, National Microbiology Laboratory, Winnipeg, Canada.
FAU - Bailey, R C
AU  - Bailey RC
FAU - Moses, S
AU  - Moses S
FAU - Plummer, F A
AU  - Plummer FA
FAU - Luo, M
AU  - Luo M
LA  - eng
SI  - GENBANK/KC503840
SI  - GENBANK/KC503841
SI  - GENBANK/KC525951
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
PL  - England
TA  - Tissue Antigens
JT  - Tissue antigens
JID - 0331072
RN  - 0 (Codon)
RN  - 0 (HLA-B Antigens)
RN  - 0 (HLA-C Antigens)
RN  - 0 (HLA-DP alpha-Chains)
RN  - 0 (HLA-DPA1 antigen)
SB  - IM
MH  - Africa, Eastern
MH  - *Alleles
MH  - Amino Acid Substitution
MH  - Base Sequence
MH  - Circumcision, Male
MH  - Codon
MH  - Exons
MH  - HLA-B Antigens/*genetics/immunology
MH  - HLA-C Antigens/*genetics/immunology
MH  - HLA-DP alpha-Chains/*genetics/immunology
MH  - Histocompatibility Testing
MH  - Humans
MH  - Male
MH  - Molecular Sequence Data
MH  - Sequence Alignment
MH  - Sequence Analysis, DNA
OTO - NOTNLM
OT  - B*58:43
OT  - C*03:190
OT  - DPA1*01:12
OT  - HLA-DPA1
OT  - Kenyan
OT  - human leukocyte antigen-B
OT  - human leukocyte antigen-C
OT  - taxonomy-based sequence analysis
EDAT- 2013/07/16 06:00
MHDA- 2014/01/28 06:00
CRDT- 2013/07/16 06:00
PHST- 2013/03/28 00:00 [received]
PHST- 2013/05/06 00:00 [revised]
PHST- 2013/05/28 00:00 [accepted]
PHST- 2013/07/16 06:00 [entrez]
PHST- 2013/07/16 06:00 [pubmed]
PHST- 2014/01/28 06:00 [medline]
AID - 10.1111/tan.12157 [doi]
PST - ppublish
SO  - Tissue Antigens. 2013 Aug;82(2):131-3. doi: 10.1111/tan.12157.