PMID- 23906005 OWN - NLM STAT- MEDLINE DCOM- 20141210 LR - 20140410 IS - 2042-3306 (Electronic) IS - 0425-1644 (Linking) VI - 46 IP - 3 DP - 2014 May TI - Polymorphisms in TNC and COL5A1 genes are associated with risk of superficial digital flexor tendinopathy in National Hunt Thoroughbred racehorses. PG - 289-93 LID - 10.1111/evj.12134 [doi] AB - REASONS FOR PERFORMING THE STUDY: To explore whether genetic susceptibility is a potential risk factor for superficial digital flexor (SDF) tendinopathy in Thoroughbred (TB) racehorses. OBJECTIVES: To identify informative single nucleotide polymorphisms (SNPs) that capture genetic diversity across a range of candidate genes and to investigate, in a case-control study, their association with SDF tendinopathy in UK National Hunt TB racehorses in training. STUDY DESIGN: Case-control candidate gene association study. METHODS: This study used in silico gene assembly and DNA sequencing to screen candidate genes for SNPs. Seven candidate genes were selected using a hypothesis-driven approach: tenascin-C (TNC), collagen, type 1, alpha 1 (COL1A1), collagen, type 5, alpha 1 (COL5A1), matrix metalloproteinase type 3 (MMP3), matrix metalloproteinase type 13 (MMP13), fibromodulin (FMOD) and cartilage oligomeric matrix protein (COMP). The SNPs were validated in DNA isolated from 48 TB racehorses and used to genotype 270 racehorses with SDF tendinopathy and 270 yard-matched controls. Genotyping of cases and controls was performed using SNaPshot. RESULTS: Racehorses heterozygous for the TNC BIEC2-696469 polymorphism were less likely to have SDF tendinopathy than racehorses homozygous for the wild-type allele (odds ratio [OR] 0.56, 95% confidence interval [CI] 0.36-0.85, P = 0.01). This finding remained significant after adjustment for age and racing background (OR 0.57, 95% CI 0.36-0.92, P = 0.03). Racehorses homozygous for the novel COL5A1 COL5A1_01 variant allele were nearly 3 times more likely to have SDF tendinopathy than those homozygous for the wild-type allele (OR 2.82, 95% CI 1.25-6.35, P = 0.01); this association remained significant after adjustment for age and racing background (OR 2.77, 95% CI 1.18-6.53, P = 0.03). CONCLUSIONS: Results suggest that sequence variants in TNC and COL5A1 genes are associated with SDF tendinopathy in TB racehorses. In future genetic markers may be used to identify horses at risk of SDF tendinopathy. CI - (c) 2013 EVJ Ltd. FAU - Tully, L J AU - Tully LJ AD - Royal Veterinary College, London, UK. FAU - Murphy, A M AU - Murphy AM FAU - Smith, R K W AU - Smith RK FAU - Hulin-Curtis, S L AU - Hulin-Curtis SL FAU - Verheyen, K L P AU - Verheyen KL FAU - Price, J S AU - Price JS LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20130916 PL - United States TA - Equine Vet J JT - Equine veterinary journal JID - 0173320 RN - 0 (Collagen Type V) RN - 0 (Tenascin) SB - IM MH - Animals MH - Case-Control Studies MH - Collagen Type V/genetics/*metabolism MH - Forelimb MH - Gene Expression Regulation MH - *Genetic Predisposition to Disease MH - Horse Diseases/*genetics MH - Horses MH - Male MH - *Polymorphism, Genetic MH - Tenascin/genetics/*metabolism MH - Tendinopathy/genetics/*veterinary OTO - NOTNLM OT - candidate genes OT - genetics OT - horse OT - racehorse OT - superficial digital flexor tendon OT - tendon injury EDAT- 2013/08/03 06:00 MHDA- 2014/12/15 06:00 CRDT- 2013/08/03 06:00 PHST- 2013/03/06 00:00 [received] PHST- 2013/06/27 00:00 [accepted] PHST- 2013/08/03 06:00 [entrez] PHST- 2013/08/03 06:00 [pubmed] PHST- 2014/12/15 06:00 [medline] AID - 10.1111/evj.12134 [doi] PST - ppublish SO - Equine Vet J. 2014 May;46(3):289-93. doi: 10.1111/evj.12134. Epub 2013 Sep 16.