PMID- 23925433 OWN - NLM STAT- MEDLINE DCOM- 20140325 LR - 20211021 IS - 1539-0829 (Electronic) IS - 1534-4827 (Linking) VI - 13 IP - 5 DP - 2013 Oct TI - Candidate genes expressed in human islets and their role in the pathogenesis of type 1 diabetes. PG - 633-41 LID - 10.1007/s11892-013-0408-6 [doi] AB - In type 1 diabetes (T1D), the insulin-producing beta cells are destroyed by an immune-mediated process leading to complete insulin deficiency. There is a strong genetic component in T1D. Genes located in the human leukocyte antigen (HLA) region are the most important genetic determinants of disease, but more than 40 additional loci are known to significantly affect T1D risk. Since most of the currently known genetic candidates have annotated immune cell functions, it is generally considered that most of the genetic susceptibility in T1D is caused by variation in genes affecting immune cell function. Recent studies, however, indicate that most T1D candidate genes are expressed in human islets suggesting that the functions of the genes are not restricted to immune cells, but also play roles in the islets and possibly the beta cells. Several candidates change expression levels within the islets following exposure to proinflammatory cytokines highlighting that these genes may be involved in the response of beta cells to immune attack. In this review, the compiling evidence that many of the candidate genes are expressed in islets and beta cells will be presented. Further, we perform the first systematic human islet expression analysis of all genes located in 50 T1D-associated GWAS loci using a published RNA sequencing dataset. We find that 336 out of 857 genes are expressed in human islets and that many of these interact in protein networks. Finally, the potential pathogenetic roles of some candidate genes will be discussed. FAU - Storling, Joachim AU - Storling J AD - Copenhagen Diabetes Research Center, Department of Paediatrics, Herlev University Hospital, Herlev Ringvej, DK-2730, Herlev, Denmark, joachim.stoerling@regionh.dk. FAU - Brorsson, Caroline Anna AU - Brorsson CA LA - eng PT - Journal Article PT - Review PL - United States TA - Curr Diab Rep JT - Current diabetes reports JID - 101093791 SB - IM MH - Diabetes Mellitus, Type 1/*genetics/pathology MH - *Gene Expression Regulation MH - *Genetic Association Studies MH - *Genetic Predisposition to Disease MH - Humans MH - Islets of Langerhans/*metabolism/pathology MH - Reproducibility of Results EDAT- 2013/08/09 06:00 MHDA- 2014/03/26 06:00 CRDT- 2013/08/09 06:00 PHST- 2013/08/09 06:00 [entrez] PHST- 2013/08/09 06:00 [pubmed] PHST- 2014/03/26 06:00 [medline] AID - 10.1007/s11892-013-0408-6 [doi] PST - ppublish SO - Curr Diab Rep. 2013 Oct;13(5):633-41. doi: 10.1007/s11892-013-0408-6.