PMID- 24081332 OWN - NLM STAT- MEDLINE DCOM- 20140107 LR - 20211021 IS - 1098-5549 (Electronic) IS - 0270-7306 (Print) IS - 0270-7306 (Linking) VI - 33 IP - 23 DP - 2013 Dec TI - The MLL3/MLL4 branches of the COMPASS family function as major histone H3K4 monomethylases at enhancers. PG - 4745-54 LID - 10.1128/MCB.01181-13 [doi] AB - Histone H3 lysine 4 (H3K4) can be mono-, di-, and trimethylated by members of the COMPASS (complex of proteins associated with Set1) family from Saccharomyces cerevisiae to humans, and these modifications can be found at distinct regions of the genome. Monomethylation of histone H3K4 (H3K4me1) is relatively more enriched at metazoan enhancer regions compared to trimethylated histone H3K4 (H3K4me3), which is enriched at transcription start sites in all eukaryotes. Our recent studies of Drosophila melanogaster demonstrated that the Trithorax-related (Trr) branch of the COMPASS family regulates enhancer activity and is responsible for the implementation of H3K4me1 at these regions. There are six COMPASS family members in mammals, two of which, MLL3 (GeneID 58508) and MLL4 (GeneID 8085), are most closely related to Drosophila Trr. Here, we use chromatin immunoprecipitation-sequencing (ChIP-seq) of this class of COMPASS family members in both human HCT116 cells and mouse embryonic stem cells and find that MLL4 is preferentially found at enhancer regions. MLL3 and MLL4 are frequently mutated in cancer, and indeed, the widely used HCT116 cancer cell line contains inactivating mutations in the MLL3 gene. Using HCT116 cells in which MLL4 has also been knocked out, we demonstrate that MLL3 and MLL4 are major regulators of H3K4me1 in these cells, with the greatest loss of monomethylation at enhancer regions. Moreover, we find a redundant role between Mll3 (GeneID 231051) and Mll4 (GeneID 381022) in enhancer H3K4 monomethylation in mouse embryonic fibroblast (MEF) cells. These findings suggest that mammalian MLL3 and MLL4 function in the regulation of enhancer activity and that mutations of MLL3 and MLL4 that are found in cancers could exert their properties through malfunction of these Trr/MLL3/MLL4-specific (Trrific) enhancers. FAU - Hu, Deqing AU - Hu D AD - Stowers Institute for Medical Research, Kansas City, Missouri, USA. FAU - Gao, Xin AU - Gao X FAU - Morgan, Marc A AU - Morgan MA FAU - Herz, Hans-Martin AU - Herz HM FAU - Smith, Edwin R AU - Smith ER FAU - Shilatifard, Ali AU - Shilatifard A LA - eng GR - R01 CA150265/CA/NCI NIH HHS/United States GR - R01CA150265/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural DEP - 20130930 PL - United States TA - Mol Cell Biol JT - Molecular and cellular biology JID - 8109087 RN - 0 (DNA-Binding Proteins) RN - 0 (Histones) RN - 0 (KMT2C protein, human) RN - EC 2.1.1.43 (Histone-Lysine N-Methyltransferase) RN - EC 2.1.1.43 (MLL4 protein, human) SB - IM MH - Animals MH - DNA-Binding Proteins/*physiology MH - *Enhancer Elements, Genetic MH - Epigenesis, Genetic MH - Gene Expression MH - HCT116 Cells MH - Histone-Lysine N-Methyltransferase MH - Histones/*metabolism MH - Humans MH - Methylation MH - Mice MH - Neoplasms/genetics/metabolism MH - *Protein Processing, Post-Translational MH - Protein Transport PMC - PMC3838007 EDAT- 2013/10/02 06:00 MHDA- 2014/01/08 06:00 PMCR- 2014/06/01 CRDT- 2013/10/02 06:00 PHST- 2013/10/02 06:00 [entrez] PHST- 2013/10/02 06:00 [pubmed] PHST- 2014/01/08 06:00 [medline] PHST- 2014/06/01 00:00 [pmc-release] AID - MCB.01181-13 [pii] AID - 01181-13 [pii] AID - 10.1128/MCB.01181-13 [doi] PST - ppublish SO - Mol Cell Biol. 2013 Dec;33(23):4745-54. doi: 10.1128/MCB.01181-13. Epub 2013 Sep 30.