PMID- 24110373 OWN - NLM STAT- MEDLINE DCOM- 20150619 LR - 20200928 IS - 2694-0604 (Electronic) IS - 2375-7477 (Linking) VI - 2013 DP - 2013 TI - Reconfiguration-based implementation of SVM classifier on FPGA for Classifying Microarray data. PG - 3058-61 LID - 10.1109/EMBC.2013.6610186 [doi] AB - Classifying Microarray data, which are of high dimensional nature, requires high computational power. Support Vector Machines-based classifier (SVM) is among the most common and successful classifiers used in the analysis of Microarray data but also requires high computational power due to its complex mathematical architecture. Implementing SVM on hardware exploits the parallelism available within the algorithm kernels to accelerate the classification of Microarray data. In this work, a flexible, dynamically and partially reconfigurable implementation of the SVM classifier on Field Programmable Gate Array (FPGA) is presented. The SVM architecture achieved up to 85x speed-up over equivalent general purpose processor (GPP) showing the capability of FPGAs in enhancing the performance of SVM-based analysis of Microarray data as well as future bioinformatics applications. FAU - Hussain, Hanaa M AU - Hussain HM FAU - Benkrid, Khaled AU - Benkrid K FAU - Seker, Huseyin AU - Seker H LA - eng PT - Journal Article PL - United States TA - Annu Int Conf IEEE Eng Med Biol Soc JT - Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference JID - 101763872 SB - IM MH - Computational Biology/methods MH - Computer Simulation MH - Computers MH - Data Collection MH - Electronics MH - Equipment Design MH - Microarray Analysis/*instrumentation/methods MH - Optical Devices MH - *Signal Processing, Computer-Assisted MH - Software MH - *Support Vector Machine EDAT- 2013/10/11 06:00 MHDA- 2015/06/20 06:00 CRDT- 2013/10/11 06:00 PHST- 2013/10/11 06:00 [entrez] PHST- 2013/10/11 06:00 [pubmed] PHST- 2015/06/20 06:00 [medline] AID - 10.1109/EMBC.2013.6610186 [doi] PST - ppublish SO - Annu Int Conf IEEE Eng Med Biol Soc. 2013;2013:3058-61. doi: 10.1109/EMBC.2013.6610186.