PMID- 24128087 OWN - NLM STAT- MEDLINE DCOM- 20150922 LR - 20220402 IS - 1607-842X (Electronic) IS - 0891-6934 (Print) IS - 0891-6934 (Linking) VI - 47 IP - 4 DP - 2014 Jun TI - Metabolic control of the epigenome in systemic Lupus erythematosus. PG - 256-64 LID - 10.3109/08916934.2013.834495 [doi] AB - Epigenetic mechanisms are proposed to underlie aberrant gene expression in systemic lupus erythematosus (SLE) that results in dysregulation of the immune system and loss of tolerance. Modifications of DNA and histones require substrates derived from diet and intermediary metabolism. DNA and histone methyltransferases depend on S-adenosylmethionine (SAM) as a methyl donor. SAM is generated from adenosine triphosphate (ATP) and methionine by methionine adenosyltransferase (MAT), a redox-sensitive enzyme in the SAM cycle. The availability of B vitamins and methionine regulate SAM generation. The DNA of SLE patients is hypomethylated, indicating dysfunction in the SAM cycle and methyltransferase activity. Acetyl-CoA, which is necessary for histone acetylation, is generated from citrate produced in mitochondria. Mitochondria are also responsible for de novo synthesis of flavin adenine dinucleotide (FAD) for histone demethylation. Mitochondrial oxidative phosphorylation is the dominant source of ATP. The depletion of ATP in lupus T cells may affect MAT activity as well as adenosine monophosphate (AMP) activated protein kinase (AMPK), which phosphorylates histones and inhibits mechanistic target of rapamycin (mTOR). In turn, mTOR can modify epigenetic pathways including methylation, demethylation, and histone phosphorylation and mediates enhanced T-cell activation in SLE. Beyond their role in metabolism, mitochondria are the main source of reactive oxygen intermediates (ROI), which activate mTOR and regulate the activity of histone and DNA modifying enzymes. In this review we will focus on the sources of metabolites required for epigenetic regulation and how the flux of the underlying metabolic pathways affects gene expression. FAU - Oaks, Zachary AU - Oaks Z AD - Division of Rheumatology, Departments of Medicine, Microbiology and Immunology, and Biochemistry and Molecular Biology, State University of New York, Upstate Medical University, College of Medicine , Syracuse, NY , USA. FAU - Perl, Andras AU - Perl A LA - eng GR - R01 AI072648/AI/NIAID NIH HHS/United States GR - U01 AR076092/AR/NIAMS NIH HHS/United States GR - AI072648/AI/NIAID NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't PT - Review DEP - 20131016 PL - England TA - Autoimmunity JT - Autoimmunity JID - 8900070 RN - 0 (Histones) RN - 7LP2MPO46S (S-Adenosylmethionine) RN - EC 2.1.1.- (Histone Methyltransferases) RN - EC 2.1.1.43 (Histone-Lysine N-Methyltransferase) SB - IM MH - Animals MH - *DNA Methylation MH - *Epigenesis, Genetic MH - Histone Methyltransferases MH - Histone-Lysine N-Methyltransferase/immunology/metabolism MH - *Histones/immunology/metabolism MH - Humans MH - *Lupus Erythematosus, Systemic/genetics/immunology/metabolism MH - Lymphocyte Activation MH - S-Adenosylmethionine/immunology/metabolism MH - T-Lymphocytes/immunology PMC - PMC4034124 MID - NIHMS580329 OTO - NOTNLM OT - Epigenetics OT - SLE OT - genetics OT - metabolism COIS- Declaration of interest The authors alone are responsible for the content and writing of the paper. EDAT- 2013/10/17 06:00 MHDA- 2015/09/24 06:00 PMCR- 2014/06/01 CRDT- 2013/10/17 06:00 PHST- 2013/10/17 06:00 [entrez] PHST- 2013/10/17 06:00 [pubmed] PHST- 2015/09/24 06:00 [medline] PHST- 2014/06/01 00:00 [pmc-release] AID - 10.3109/08916934.2013.834495 [doi] PST - ppublish SO - Autoimmunity. 2014 Jun;47(4):256-64. doi: 10.3109/08916934.2013.834495. Epub 2013 Oct 16.