PMID- 24369789 OWN - NLM STAT- MEDLINE DCOM- 20140812 LR - 20211021 IS - 1471-2229 (Electronic) IS - 1471-2229 (Linking) VI - 13 DP - 2013 Dec 27 TI - The sequence flanking the N-terminus of the CLV3 peptide is critical for its cleavage and activity in stem cell regulation in Arabidopsis. PG - 225 LID - 10.1186/1471-2229-13-225 [doi] AB - BACKGROUND: Although it is known that CLAVATA3 (CLV3) acts as 12- and/or 13-amino acid (AA) secreted peptides to regulate the number of stem cells in shoot apical meristems (SAMs), how functional CLV3 peptides are generated and if any particular sequences are required for the processing remain largely unknown. RESULTS: We developed a mass spectrometry (MS)-based in vitro assay to monitor the cleavage of heterologously produced CLV3 fusion protein. Through co-cultivation of the fusion protein with Arabidopsis seedlings, we identified two cleavage sites: the previously reported one before Arg70 and a new one before Met39. Using synthetic peptides together with MALDI-Tof-MS analyses, we demonstrated that the non-conserved 5-AA motifs flanking N-termini of the CLV3 and its orthologous CLE1 peptides were critical for their cleavages and optimal activities in vitro. We also found that substitutions of Leu69 by Ala in fusion protein and in synthetic peptide of CLV3 compromised their cleavages, leading to significantly reduced activities in regulating the sizes of shoot and root meristems. CONCLUSIONS: These results suggest that 5-AA residues flanking the N-terminus of CLV3 peptide are required for proper cleavages and optimal function in stem cell regulation. FAU - Xu, Ting-Ting AU - Xu TT FAU - Song, Xiu-Fen AU - Song XF FAU - Ren, Shi-Chao AU - Ren SC FAU - Liu, Chun-Ming AU - Liu CM AD - Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Nanxincun 20, Fragrant Hill, Beijing 100093, China. cmliu@ibcas.ac.cn. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20131227 PL - England TA - BMC Plant Biol JT - BMC plant biology JID - 100967807 RN - 0 (AT2G27250 protein, Arabidopsis) RN - 0 (Arabidopsis Proteins) RN - 0 (Peptides) RN - 0 (Recombinant Fusion Proteins) RN - GMW67QNF9C (Leucine) SB - IM MH - Amino Acid Motifs MH - Amino Acid Sequence MH - Arabidopsis/*cytology/*metabolism MH - Arabidopsis Proteins/*chemistry/*metabolism MH - Biological Assay MH - Leucine/metabolism MH - Molecular Sequence Data MH - Peptides/chemistry MH - Plant Roots/metabolism MH - Recombinant Fusion Proteins/isolation & purification MH - Seedlings/growth & development MH - Sequence Alignment MH - Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization MH - Stem Cells/*cytology/metabolism MH - Structure-Activity Relationship PMC - PMC3878228 EDAT- 2013/12/29 06:00 MHDA- 2014/08/13 06:00 PMCR- 2013/12/27 CRDT- 2013/12/28 06:00 PHST- 2013/09/21 00:00 [received] PHST- 2013/12/20 00:00 [accepted] PHST- 2013/12/28 06:00 [entrez] PHST- 2013/12/29 06:00 [pubmed] PHST- 2014/08/13 06:00 [medline] PHST- 2013/12/27 00:00 [pmc-release] AID - 1471-2229-13-225 [pii] AID - 10.1186/1471-2229-13-225 [doi] PST - epublish SO - BMC Plant Biol. 2013 Dec 27;13:225. doi: 10.1186/1471-2229-13-225.