PMID- 24694233 OWN - NLM STAT- MEDLINE DCOM- 20141124 LR - 20191027 IS - 1875-5453 (Electronic) IS - 1389-2002 (Linking) VI - 15 IP - 2 DP - 2014 Feb TI - Human leukocyte antigen (HLA) pharmacogenomic tests: potential and pitfalls. PG - 196-201 AB - Adverse drug reactions involving a range of prescribed drugs and affecting the skin, liver and other organs show strong associations with particular HLA alleles. For some reactions, HLA typing prior to prescription, so that those positive for the risk allele are not given the drug associated with the reaction, shows high positive and negative predictive values. The best example of clinical implementation relates to the hypersensitivity reaction induced by the anti-HIV drug abacavir. When this reaction is phenotyped accurately, 100% of those who develop it are positive for HLA-B*57:01. Drug regulators worldwide now recommend genotyping for HLA-B*57:01 before abacavir is prescribed. Serious skin rashes including Stevens-Johnson syndrome and toxic epidermal necrosis can be induced by carbamazepine and other anticonvulsant drugs. In certain East Asians, these reactions are significantly associated with HLA-B*15:02, and typing for this allele is now recommended prior to carbamazepine prescription in these populations. Other HLA associations have been described for skin rash induced by carbamazepine, allopurinol and nevirapine and for liver injury induced by flucloxacillin, amoxicillin-clavulanate, lapatanib, lumiracoxib and ticlopidine. However, the predictive values for typing HLA alleles associated with these adverse reactions are lower. Clinical implementation therefore seems unlikely. Performing HLA typing is relatively complex compared with genotyping assays for single nucleotide polymorphisms. With emphasis on HLA-B*57:01, the approaches used commonly, including use of sequence-specific oligonucleotide PCR primers and DNA sequencing are considered, together with their successful implementation. Genotyping single nucleotide polymorphisms tagging HLA alleles is a simpler alternative to HLA typing but appears insufficiently accurate for clinical use. FAU - Daly, Ann K AU - Daly AK AD - Institute of Cellular Medicine, Newcastle University, Framlington Place, Newcastle upon Tyne NE2 4HH, UK. a.k.daly@ncl.ac.uk. LA - eng PT - Journal Article PL - Netherlands TA - Curr Drug Metab JT - Current drug metabolism JID - 100960533 RN - 0 (DNA Primers) RN - 0 (HLA Antigens) RN - 0 (HLA-B Antigens) RN - 0 (HLA-B57 antigen) SB - IM MH - DNA Primers MH - Drug-Related Side Effects and Adverse Reactions/*genetics MH - Genetic Testing/methods MH - Genotype MH - HLA Antigens/*genetics MH - HLA-B Antigens/genetics MH - Humans MH - Pharmacogenetics/*methods MH - Polymorphism, Single Nucleotide MH - Predictive Value of Tests MH - Sequence Analysis, DNA/methods EDAT- 2014/04/04 06:00 MHDA- 2014/12/15 06:00 CRDT- 2014/04/04 06:00 PHST- 2013/10/07 00:00 [received] PHST- 2013/12/27 00:00 [revised] PHST- 2014/01/21 00:00 [accepted] PHST- 2014/04/04 06:00 [entrez] PHST- 2014/04/04 06:00 [pubmed] PHST- 2014/12/15 06:00 [medline] AID - CDM-59811 [pii] AID - 10.2174/138920021502140327180733 [doi] PST - ppublish SO - Curr Drug Metab. 2014 Feb;15(2):196-201. doi: 10.2174/138920021502140327180733.