PMID- 24728343 OWN - NLM STAT- MEDLINE DCOM- 20141209 LR - 20190221 IS - 1791-2423 (Electronic) IS - 1019-6439 (Linking) VI - 44 IP - 6 DP - 2014 Jun TI - High-resolution detection of recurrent aberrations in lung adenocarcinomas by array comparative genomic hybridization and expression analysis of selective genes by quantitative PCR. PG - 2068-76 LID - 10.3892/ijo.2014.2384 [doi] AB - Genomic abnormalities are the hallmark of cancers and may harbor potential candidate genes important for cancer development and progression. We performed array comparative genomic hybridization (array CGH) on 36 cases of primary lung adenocarcinoma (AD) using an array containing 2621 BAC or PAC clones spanning the genome at an average interval of 1 Mb. Array CGH identified the commonest aberrations consisting of DNA gains within 1p, 1q, 5p, 5q, 7p, 7q, 8q, 11q, 12p, 13q, 16p, 17q, 20q, and losses with 6q, 9p, 10q and 18q. High-level copy gains involved mainly 7p21-p15 and 20q13.3. Dual color fluorescence in situ hybridization (FISH) was performed on a selective locus for validation of array CGH results. Genomic aberrations were compared with different clinicopathological features and a trend of higher number of aberrations in tumors with aggressive phenotypes and current tobacco exposure was identified. According to array CGH data, 23 candidate genes were selected for quantitative PCR (qPCR) analysis. The concordance observed between the genomic and expression changes in most of the genes suggested that they could be candidate cancer-related genes that contributed to the development of lung AD. FAU - Zhu, Hong AU - Zhu H AD - Department of Pathology, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, P.R. China. FAU - Wong, Maria Pik AU - Wong MP AD - Department of Pathology, The University of Hong Kong, Hong Kong, SAR, P.R. China. FAU - Tin, Vicky AU - Tin V AD - Department of Pathology, The University of Hong Kong, Hong Kong, SAR, P.R. China. LA - eng PT - Journal Article DEP - 20140411 PL - Greece TA - Int J Oncol JT - International journal of oncology JID - 9306042 SB - IM MH - Adenocarcinoma/*genetics/*pathology MH - Adenocarcinoma of Lung MH - Adult MH - Aged MH - Aged, 80 and over MH - Chromosome Aberrations MH - Comparative Genomic Hybridization MH - Female MH - Gene Expression Profiling MH - Gene Expression Regulation, Neoplastic MH - Genome, Human MH - Humans MH - Lung Neoplasms/*genetics/*pathology MH - Male MH - Middle Aged MH - Neoplasm Staging MH - Tobacco Use/adverse effects EDAT- 2014/04/15 06:00 MHDA- 2014/12/15 06:00 CRDT- 2014/04/15 06:00 PHST- 2014/01/26 00:00 [received] PHST- 2014/03/28 00:00 [accepted] PHST- 2014/04/15 06:00 [entrez] PHST- 2014/04/15 06:00 [pubmed] PHST- 2014/12/15 06:00 [medline] AID - 10.3892/ijo.2014.2384 [doi] PST - ppublish SO - Int J Oncol. 2014 Jun;44(6):2068-76. doi: 10.3892/ijo.2014.2384. Epub 2014 Apr 11.