PMID- 24821053 OWN - NLM STAT- MEDLINE DCOM- 20150814 LR - 20191210 IS - 1364-5528 (Electronic) IS - 0003-2654 (Linking) VI - 139 IP - 13 DP - 2014 Jul 7 TI - Label-free colorimetric aptasensor for IgE using DNA pseudoknot probe. PG - 3347-51 LID - 10.1039/c4an00253a [doi] AB - The development of simple and low-cost approaches to the detection of immunoglobulin E (IgE) would provide a method for the early diagnosis and prevention of atopic diseases. The current methods of detection are generally tedious, multi-step processes and are limited by the high cost of the labeled proteins. We describe here a label-free structure-switching colorimetric method for the simple measurement of IgE using DNA pseudoknot probes and gold nanoparticles. In the absence of a target the IgE aptamer probe adopts a pseudoknot conformation that dissociates a capture probe from the unmodified gold nanoparticles. However, when IgE binds to the aptamer probe, the pseudoknot is resolved, leading to a favorable hybridization between the 3' terminal loop of the aptamer probe and the capture probe; this induces the aggregation of the gold nanoparticles. As a result, the colorimetric IgE sensor using this structure-switching mechanism is sensitive, specific and convenient, and the assay works even when challenged with complicated biological matrixes such as vaginal fluids. The proposed method is expected to be of great clinical value for IgE detection and could be used, after appropriate design, for sensing applications of other structured aptamers. FAU - Chang, Chia-Chen AU - Chang CC AD - Institute of Biomedical Engineering, National Taiwan University, Taipei 106, Taiwan, ROC. cwlinx@ntu.edu.tw. FAU - Chen, Chen-Yu AU - Chen CY FAU - Zhao, Xihong AU - Zhao X FAU - Wu, Tzu-Heng AU - Wu TH FAU - Wei, Shih-Chung AU - Wei SC FAU - Lin, Chii-Wann AU - Lin CW LA - eng PT - Evaluation Study PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - England TA - Analyst JT - The Analyst JID - 0372652 RN - 0 (Aptamers, Nucleotide) RN - 37341-29-0 (Immunoglobulin E) SB - IM MH - Aptamers, Nucleotide/*chemistry MH - Base Sequence MH - Colorimetry/*methods MH - Humans MH - Immunoglobulin E/*analysis MH - Limit of Detection MH - Molecular Sequence Data MH - Nucleic Acid Conformation EDAT- 2014/05/14 06:00 MHDA- 2015/08/15 06:00 CRDT- 2014/05/14 06:00 PHST- 2014/05/14 06:00 [entrez] PHST- 2014/05/14 06:00 [pubmed] PHST- 2015/08/15 06:00 [medline] AID - 10.1039/c4an00253a [doi] PST - ppublish SO - Analyst. 2014 Jul 7;139(13):3347-51. doi: 10.1039/c4an00253a.