PMID- 24973920 OWN - NLM STAT- MEDLINE DCOM- 20140919 LR - 20211201 IS - 1546-170X (Electronic) IS - 1078-8956 (Print) IS - 1078-8956 (Linking) VI - 20 IP - 7 DP - 2014 Jul TI - Epigenetic targeting of Hedgehog pathway transcriptional output through BET bromodomain inhibition. PG - 732-40 LID - 10.1038/nm.3613 [doi] AB - Hedgehog signaling drives oncogenesis in several cancers, and strategies targeting this pathway have been developed, most notably through inhibition of Smoothened (SMO). However, resistance to Smoothened inhibitors occurs by genetic changes of Smoothened or other downstream Hedgehog components. Here we overcome these resistance mechanisms by modulating GLI transcription through inhibition of bromo and extra C-terminal (BET) bromodomain proteins. We show that BRD4 and other BET bromodomain proteins regulate GLI transcription downstream of SMO and suppressor of fused (SUFU), and chromatin immunoprecipitation studies reveal that BRD4 directly occupies GLI1 and GLI2 promoters, with a substantial decrease in engagement of these sites after treatment with JQ1, a small-molecule inhibitor targeting BRD4. Globally, genes associated with medulloblastoma-specific GLI1 binding sites are downregulated in response to JQ1 treatment, supporting direct regulation of GLI activity by BRD4. Notably, patient- and GEMM (genetically engineered mouse model)-derived Hedgehog-driven tumors (basal cell carcinoma, medulloblastoma and atypical teratoid rhabdoid tumor) respond to JQ1 even when harboring genetic lesions rendering them resistant to Smoothened antagonists. Altogether, our results reveal BET proteins as critical regulators of Hedgehog pathway transcriptional output and nominate BET bromodomain inhibitors as a strategy for treating Hedgehog-driven tumors with emerged or a priori resistance to Smoothened antagonists. FAU - Tang, Yujie AU - Tang Y AD - 1] Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. [2] Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. FAU - Gholamin, Sharareh AU - Gholamin S AD - Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. FAU - Schubert, Simone AU - Schubert S AD - 1] Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. [2] Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. FAU - Willardson, Minde I AU - Willardson MI AD - Department of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin, USA. FAU - Lee, Alex AU - Lee A AD - Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California, USA. FAU - Bandopadhayay, Pratiti AU - Bandopadhayay P AD - 1] Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. [2] Pediatric Neuro-oncology, Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. [3] Division of Pediatric Hematology/Oncology, Boston Children's Hospital, Boston, Massachusetts, USA. [4] Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. FAU - Bergthold, Guillame AU - Bergthold G AD - 1] Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. [2] Pediatric Neuro-oncology, Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. [3] Division of Pediatric Hematology/Oncology, Boston Children's Hospital, Boston, Massachusetts, USA. FAU - Masoud, Sabran AU - Masoud S AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Nguyen, Brian AU - Nguyen B AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Vue, Nujsaubnusi AU - Vue N AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Balansay, Brianna AU - Balansay B AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Yu, Furong AU - Yu F AD - 1] Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. [2] Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. FAU - Oh, Sekyung AU - Oh S AD - 1] Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. [2] Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. FAU - Woo, Pamelyn AU - Woo P AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Chen, Spenser AU - Chen S AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Ponnuswami, Anitha AU - Ponnuswami A AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Monje, Michelle AU - Monje M AD - Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. FAU - Atwood, Scott X AU - Atwood SX AD - Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California, USA. FAU - Whitson, Ramon J AU - Whitson RJ AD - Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California, USA. FAU - Mitra, Siddhartha AU - Mitra S AD - Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. FAU - Cheshier, Samuel H AU - Cheshier SH AD - Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. FAU - Qi, Jun AU - Qi J AD - Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. FAU - Beroukhim, Rameen AU - Beroukhim R AD - 1] Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. [2] Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [3] Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. FAU - Tang, Jean Y AU - Tang JY AD - Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California, USA. FAU - Wechsler-Reya, Rob AU - Wechsler-Reya R AD - Sanford-Burnham Medical Research, La Jolla, California, USA. FAU - Oro, Anthony E AU - Oro AE AUID- ORCID: 000000026261138X AD - Program in Epithelial Biology, Stanford University School of Medicine, Stanford, California, USA. FAU - Link, Brian A AU - Link BA AD - Department of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin, USA. FAU - Bradner, James E AU - Bradner JE AD - 1] Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. [2] Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [3] Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA. FAU - Cho, Yoon-Jae AU - Cho YJ AD - 1] Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California, USA. [2] Department of Neurosurgery, Stanford University School of Medicine, Stanford, California, USA. [3] Stanford Cancer Institute, Stanford University Medical Center, Stanford, California, USA. LA - eng GR - U01 CA176287/CA/NCI NIH HHS/United States GR - R01 EY014167/EY/NEI NIH HHS/United States GR - U01-CA176287/CA/NCI NIH HHS/United States GR - R01 AR054780/AR/NIAMS NIH HHS/United States GR - R01 CA159859/CA/NCI NIH HHS/United States GR - R01 EY016060/EY/NEI NIH HHS/United States GR - R01-CA159859/CA/NCI NIH HHS/United States GR - R01 AR046786/AR/NIAMS NIH HHS/United States GR - R01 CA157895/CA/NCI NIH HHS/United States GR - P30 EY001931/EY/NEI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't DEP - 20140629 PL - United States TA - Nat Med JT - Nature medicine JID - 9502015 RN - 0 ((+)-JQ1 compound) RN - 0 (Azepines) RN - 0 (Brd4 protein, mouse) RN - 0 (Gli1 protein, mouse) RN - 0 (Gli2 protein, mouse) RN - 0 (Hedgehog Proteins) RN - 0 (Kruppel-Like Transcription Factors) RN - 0 (Ligands) RN - 0 (Nuclear Proteins) RN - 0 (Transcription Factors) RN - 0 (Triazoles) RN - 0 (Zinc Finger Protein GLI1) RN - 0 (Zinc Finger Protein Gli2) SB - IM MH - Animals MH - Azepines/pharmacology MH - *Epigenesis, Genetic MH - Hedgehog Proteins/*genetics/metabolism MH - Kruppel-Like Transcription Factors/genetics MH - Ligands MH - Mice MH - Neoplasms, Experimental/pathology MH - Nuclear Proteins/metabolism/*physiology MH - Promoter Regions, Genetic MH - Signal Transduction/physiology MH - Transcription Factors/metabolism/*physiology MH - *Transcription, Genetic MH - Triazoles/pharmacology MH - Zinc Finger Protein GLI1 MH - Zinc Finger Protein Gli2 PMC - PMC4108909 MID - NIHMS600565 COIS- Conflict of Interest: The Dana-Farber Cancer Institute has licensed drug-like derivatives of JQ1 prepared in the Bradner laboratory to Tensha Therapeutics for clinical translation as cancer therapeutics. Dana-Farber and Dr. Bradner have been provided minority equity shares in Tensha. Dr. Qi has a consultant agreement with Tensha Therapeutics. EDAT- 2014/06/30 06:00 MHDA- 2014/09/23 06:00 PMCR- 2015/01/01 CRDT- 2014/06/30 06:00 PHST- 2014/03/18 00:00 [received] PHST- 2014/05/29 00:00 [accepted] PHST- 2014/06/30 06:00 [entrez] PHST- 2014/06/30 06:00 [pubmed] PHST- 2014/09/23 06:00 [medline] PHST- 2015/01/01 00:00 [pmc-release] AID - nm.3613 [pii] AID - 10.1038/nm.3613 [doi] PST - ppublish SO - Nat Med. 2014 Jul;20(7):732-40. doi: 10.1038/nm.3613. Epub 2014 Jun 29.