PMID- 25078391 OWN - NLM STAT- MEDLINE DCOM- 20150105 LR - 20141106 IS - 1432-8798 (Electronic) IS - 0304-8608 (Linking) VI - 159 IP - 12 DP - 2014 Dec TI - Development of a tetra-primer ARMS PCR-based assay for detection of a novel single-nucleotide polymorphism in the 5' untranslated region of the bovine ITGB6 receptor gene associated with foot-and-mouth disease susceptibility in cattle. PG - 3385-9 LID - 10.1007/s00705-014-2194-0 [doi] AB - ITGB6 is known to be one of the major receptor components involved in host tropism of foot-and-mouth disease (FMD) virus in cattle. A competitive PCR technique called ARMS PCR was adapted to identify a single-nucleotide polymorphism (SNP), G29A, db SNP Id: rs109075046, in the 5' untranslated region (5'UTR) of the bovine ITGB6 gene. Genotype profiling identified three kinds of genetic variation within the targeted SNP among Frieswal crossbred cattle. The occurrence of FMD in the three genotypes was further evaluated, revealing a clear role in the incidence of FMD in the studied population. FAU - Singh, Rani AU - Singh R AD - Molecular Genetic Laboratory, Animal Genetic and Breeding Division, Central Institute for Research on Cattle (formerly Project Directorate on Cattle), Meerut Cantt, 250001, Uttar Pradesh, India. FAU - Deb, Rajib AU - Deb R FAU - Singh, Umesh AU - Singh U FAU - Alex, Rani AU - Alex R FAU - Kumar, Sushil AU - Kumar S FAU - Chakraborti, Soumendu AU - Chakraborti S FAU - Sharma, Sheetal AU - Sharma S FAU - Sengar, Gyanendra AU - Sengar G FAU - Singh, Rupali AU - Singh R LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20140731 PL - Austria TA - Arch Virol JT - Archives of virology JID - 7506870 RN - 0 (5' Untranslated Regions) RN - 0 (DNA Primers) SB - IM MH - *5' Untranslated Regions MH - Animals MH - Cattle MH - Cattle Diseases/*genetics MH - DNA Primers/genetics MH - Foot-and-Mouth Disease/*genetics MH - *Genetic Predisposition to Disease MH - Polymerase Chain Reaction/*methods MH - *Polymorphism, Single Nucleotide EDAT- 2014/08/01 06:00 MHDA- 2015/01/06 06:00 CRDT- 2014/08/01 06:00 PHST- 2014/05/31 00:00 [received] PHST- 2014/07/21 00:00 [accepted] PHST- 2014/08/01 06:00 [entrez] PHST- 2014/08/01 06:00 [pubmed] PHST- 2015/01/06 06:00 [medline] AID - 10.1007/s00705-014-2194-0 [doi] PST - ppublish SO - Arch Virol. 2014 Dec;159(12):3385-9. doi: 10.1007/s00705-014-2194-0. Epub 2014 Jul 31.