PMID- 25089700 OWN - NLM STAT- MEDLINE DCOM- 20151109 LR - 20211021 IS - 1932-6203 (Electronic) IS - 1932-6203 (Linking) VI - 9 IP - 8 DP - 2014 TI - Traumatic brain injury dysregulates microRNAs to modulate cell signaling in rat hippocampus. PG - e103948 LID - 10.1371/journal.pone.0103948 [doi] LID - e103948 AB - Traumatic brain injury (TBI) is a common cause for cognitive and communication problems, but the molecular and cellular mechanisms are not well understood. Epigenetic modifications, such as microRNA (miRNA) dysregulation, may underlie altered gene expression in the brain, especially hippocampus that plays a major role in spatial learning and memory and is vulnerable to TBI. To advance our understanding of miRNA in pathophysiological processes of TBI, we carried out a time-course microarray analysis of microRNA expression profile in rat ipsilateral hippocampus and examined histological changes, apoptosis and synapse ultrastructure of hippocampus post moderate TBI. We found that 10 out of 156 reliably detected miRNAs were significantly and consistently altered from one hour to seven days after injury. Bioinformatic and gene ontology analyses revealed 107 putative target genes, as well as several biological processes that might be initiated by those dysregulated miRNAs. Among those differentially expressed microRNAs, miR-144, miR-153 and miR-340-5p were confirmed to be elevated at all five time points after TBI by quantitative RT-PCR. Western blots showed three of the predicated target proteins, calcium/calmodulin-dependent serine protein kinase (CASK), nuclear factor erythroid 2-related factor 2 (NRF2) and alpha-synuclein (SNCA), were concurrently down- regulated, suggesting that miR-144, miR-153 and miR-340-5p may play important roles collaboratively in the pathogenesis of TBI-induced cognitive and memory impairments. These microRNAs might serve as potential targets for progress assessment and intervention against TBI to mitigate secondary damage to the brain. FAU - Liu, Liang AU - Liu L AD - Department of Forensic Medicine, Tongji Medical College of Huazhong University of Science and Technology, Wuhan, China; Key Laboratory of Evidence Science, China University of Political Science and Law, Ministry of Education, Beijing, China. FAU - Sun, Tingyi AU - Sun T AD - Department of Forensic Medicine, Tongji Medical College of Huazhong University of Science and Technology, Wuhan, China. FAU - Liu, Zilong AU - Liu Z AD - Department of Forensic Medicine, Tongji Medical College of Huazhong University of Science and Technology, Wuhan, China. FAU - Chen, Xiaorui AU - Chen X AD - Department of Forensic Medicine, Tongji Medical College of Huazhong University of Science and Technology, Wuhan, China. FAU - Zhao, Lili AU - Zhao L AD - Department of Forensic Medicine, Tongji Medical College of Huazhong University of Science and Technology, Wuhan, China. FAU - Qu, Guoqiang AU - Qu G AD - Department of Forensic Medicine, Tongji Medical College of Huazhong University of Science and Technology, Wuhan, China. FAU - Li, Qingjie AU - Li Q AD - Department of Internal Medicine, The University of Texas Medical Branch at Galveston, Galveston, Texas, United States of America. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20140804 PL - United States TA - PLoS One JT - PloS one JID - 101285081 RN - 0 (MicroRNAs) RN - 0 (NF-E2-Related Factor 2) RN - 0 (Nfe2l2 protein, rat) RN - 0 (Snca protein, rat) RN - 0 (alpha-Synuclein) RN - EC 2.7.11.1 (CASK kinases) RN - EC 2.7.4.8 (Guanylate Kinases) SB - IM MH - Animals MH - Apoptosis MH - Brain Injuries/*genetics/metabolism/pathology MH - *Epigenesis, Genetic MH - Female MH - Gene Expression Profiling MH - Gene Regulatory Networks MH - Guanylate Kinases/genetics/metabolism MH - Hippocampus/injuries/*metabolism/pathology MH - Male MH - MicroRNAs/*genetics/metabolism MH - Molecular Sequence Annotation MH - NF-E2-Related Factor 2/genetics/metabolism MH - Oligonucleotide Array Sequence Analysis MH - Rats MH - Rats, Sprague-Dawley MH - Signal Transduction MH - Synapses/*genetics/metabolism/pathology/ultrastructure MH - Time Factors MH - alpha-Synuclein/genetics/metabolism PMC - PMC4121204 COIS- Competing Interests: The authors have declared that no competing interests exist. EDAT- 2014/08/05 06:00 MHDA- 2015/11/10 06:00 PMCR- 2014/08/04 CRDT- 2014/08/05 06:00 PHST- 2014/02/09 00:00 [received] PHST- 2014/07/07 00:00 [accepted] PHST- 2014/08/05 06:00 [entrez] PHST- 2014/08/05 06:00 [pubmed] PHST- 2015/11/10 06:00 [medline] PHST- 2014/08/04 00:00 [pmc-release] AID - PONE-D-14-05827 [pii] AID - 10.1371/journal.pone.0103948 [doi] PST - epublish SO - PLoS One. 2014 Aug 4;9(8):e103948. doi: 10.1371/journal.pone.0103948. eCollection 2014.