PMID- 25364730 OWN - NLM STAT- PubMed-not-MEDLINE DCOM- 20141103 LR - 20211021 IS - 2296-634X (Print) IS - 2296-634X (Electronic) IS - 2296-634X (Linking) VI - 2 DP - 2014 TI - In silico discovery of novel transcription factors regulated by mTOR-pathway activities. PG - 23 LID - 10.3389/fcell.2014.00023 [doi] LID - 23 AB - The mammalian target of rapamycine (mTOR) pathway is a key regulator of cellular growth, development, and ageing, and unraveling its control is essential for understanding life and death of biological organisms. A motif-discovery workbench including nine tools was used to identify transcription factors involved in five basic (Insulin, MAPK, VEGF, Hypoxia, and mTOR core) activities of the mTOR pathway. Discovered transcription factors are classified as "process-specific" or "pathway-ubiquitous" with highlights toward their regulating/regulated activities within the mTOR pathway. Our transcription regulation results will facilitate further research on investigating the control mechanism in mTOR pathway. FAU - Jablonska, Agnieszka AU - Jablonska A AD - Faculty of Biotechnology and Food Sciences, Lodz University of Technology Lodz, Poland. FAU - Polouliakh, Natalia AU - Polouliakh N AD - Fundamental Research Laboratories, Sony Computer Science Laboratories Inc. Tokyo, Japan ; Systems Biology Institute Tokyo, Japan ; Graduate School of Medicine, Yokohama City University Yokohama, Japan. LA - eng PT - Journal Article DEP - 20140603 PL - Switzerland TA - Front Cell Dev Biol JT - Frontiers in cell and developmental biology JID - 101630250 PMC - PMC4206986 OTO - NOTNLM OT - bioinformatic tools and databases OT - cell signaling OT - mTOR pathway OT - orthologous genes OT - transcription factors EDAT- 2014/11/05 06:00 MHDA- 2014/11/05 06:01 PMCR- 2014/01/01 CRDT- 2014/11/04 06:00 PHST- 2014/04/01 00:00 [received] PHST- 2014/05/09 00:00 [accepted] PHST- 2014/11/04 06:00 [entrez] PHST- 2014/11/05 06:00 [pubmed] PHST- 2014/11/05 06:01 [medline] PHST- 2014/01/01 00:00 [pmc-release] AID - 10.3389/fcell.2014.00023 [doi] PST - epublish SO - Front Cell Dev Biol. 2014 Jun 3;2:23. doi: 10.3389/fcell.2014.00023. eCollection 2014.