PMID- 25520507 OWN - NLM STAT- MEDLINE DCOM- 20150420 LR - 20181113 IS - 1098-5514 (Electronic) IS - 0022-538X (Print) IS - 0022-538X (Linking) VI - 89 IP - 5 DP - 2015 Mar TI - A human herpesvirus 6A-encoded microRNA: role in viral lytic replication. PG - 2615-27 LID - 10.1128/JVI.02007-14 [doi] AB - Human herpesvirus 6A (HHV-6A), a member of the betaherpesvirus family, is associated with several human diseases. Like all herpesviruses, HHV-6A establishes a lifelong, latent infection in its host. Reactivation of HHV-6A is frequent within the immunosuppressed and immunocompromised populations and results in lytic viral replication within multiple organs, often leading to severe disease. MicroRNAs (miRNAs) are key regulators of multiple cellular processes that regulate the translation of specific transcripts. miRNAs carried by herpesviruses play important roles in modulating the host cell, thereby facilitating a suitable environment for productive viral infection and/or latency. Currently, there are approximately 150 known human herpesvirus-encoded miRNAs, although an miRNA(s) encoded by HHV-6A has yet to be reported. We hypothesized that HHV-6A, like other members of the human herpesvirus family, encodes miRNAs, which function to promote viral infection. We utilized deep sequencing of small RNA species isolated from cells harboring HHV-6A to identify five novel small noncoding RNA species that originate from the viral genome, one of which has the characteristics of a viral miRNA. These RNAs are expressed during productive infection by either bacterial artificial chromosome (BAC)-derived virus in Jjhan cells or wild-type HHV-6A strain U1102 virus in HSB2 cells and are associated with the RNA induced silencing complex (RISC) machinery. Growth analyses of mutant viruses that lack each individual miRNA revealed that a viral miRNA candidate (miR-U86) targets the HHV-6A IE gene U86, thereby regulating lytic replication. The identification and biological characterization of this HHV-6A-specific miRNA is the first step to defining how the virus regulates its life cycle. IMPORTANCE: A majority of the human population is infected with human herpesvirus 6A (HHV-6A), a betaherpesvirus family member. Infections usually occur in young children, and upon resolution, the virus remains in a latent state within the host. Importantly, during times of weakened immune responses, the virus can reactivate and is correlated with significant disease states. Viruses encode many different types of factors that both undermine the host antiviral response and regulate viral replication, including small RNA species called microRNAs (miRNAs). Here we report that HHV-6A encodes at least one miRNA, which we named miR-U86. We have characterized the requirement of this viral miRNA and its impact on the viral life cycle and found that it functions to regulate a viral protein important for efficient viral replication. Our data suggest that viral miRNAs are important for HHV-6A and that they may serve as an important therapeutic target to inhibit the virus. CI - Copyright (c) 2015, American Society for Microbiology. All Rights Reserved. FAU - Nukui, Masatoshi AU - Nukui M AD - Department of Molecular Genetics, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio, USA. FAU - Mori, Yasuko AU - Mori Y AD - Division of Clinical Virology, Kobe University Graduate School of Medicine, Kobe, Japan. FAU - Murphy, Eain A AU - Murphy EA AD - Department of Molecular Genetics, Lerner Research Institute, Cleveland Clinic, Cleveland, Ohio, USA murphye@ccf.org. LA - eng GR - R01 AI101080/AI/NIAID NIH HHS/United States GR - U54 AI057160/AI/NIAID NIH HHS/United States GR - RAI101080A/PHS HHS/United States GR - U54AI057160/AI/NIAID NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't DEP - 20141217 PL - United States TA - J Virol JT - Journal of virology JID - 0113724 RN - 0 (MicroRNAs) RN - 0 (RNA, Viral) SB - IM MH - Cell Line MH - Gene Expression Profiling MH - Herpesvirus 6, Human/genetics/*physiology MH - High-Throughput Nucleotide Sequencing MH - Humans MH - MicroRNAs/genetics/*metabolism MH - RNA, Viral/genetics/*metabolism MH - *Virus Replication PMC - PMC4325741 EDAT- 2014/12/19 06:00 MHDA- 2015/04/22 06:00 PMCR- 2015/09/01 CRDT- 2014/12/19 06:00 PHST- 2014/12/19 06:00 [entrez] PHST- 2014/12/19 06:00 [pubmed] PHST- 2015/04/22 06:00 [medline] PHST- 2015/09/01 00:00 [pmc-release] AID - JVI.02007-14 [pii] AID - 02007-14 [pii] AID - 10.1128/JVI.02007-14 [doi] PST - ppublish SO - J Virol. 2015 Mar;89(5):2615-27. doi: 10.1128/JVI.02007-14. Epub 2014 Dec 17.