PMID- 25557089 OWN - NLM STAT- MEDLINE DCOM- 20160104 LR - 20220318 IS - 1469-8137 (Electronic) IS - 0028-646X (Linking) VI - 206 IP - 2 DP - 2015 Apr TI - Characterization of two CENH3 genes and their roles in wheat evolution. PG - 839-51 LID - 10.1111/nph.13235 [doi] AB - Wheat evolution is complex as a result of successive rounds of allopolyploidization and continuous selection during domestication. Diploid and tetraploid wheat species (Triticum spp.) were used as model systems in which to study the role of centromere-specific histone H3 variant (CENH3) in wheat evolution. We characterized two types of CENH3 genes, named alphaCENH3 and betaCENH3, each of which has three slightly different copies derived from the AA, BB and DD genomes. Specific antibodies were raised against the two CENH3 proteins and were co-localized to centromeres with subtle differences. In most tetraploid wheat species, CENH3 genes are more highly expressed from the AA genome. In wild tetraploids, betaCENH3 has a much lower expression level than alphaCENH3, while in cultivated tetraploids betaCENH3 transcripts are enhanced to near alphaCENH3 levels. Comparison of the CENH3 proteins in wild and cultivated tetraploids revealed that the histone folding domain (HFD) of only betaCENH3 is under positive selection, especially in the region responsible for targeting of CENH3 to the centromere. Taken together, positive selection of betaCENH3 and its increased expression in tetraploid cultivars are indicative of adaptive evolution. Furthermore, the differences in localization between alphaCENH3 and betaCENH3 observed using fiber fluorescence in situ hybridization (FISH) and immunodetection and in developmental phenotypes resulting from virus-reduced gene silencing imply their functional diversification during wheat evolution. CI - (c) 2014 The Authors. New Phytologist (c) 2014 New Phytologist Trust. FAU - Yuan, Jing AU - Yuan J AD - State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China. FAU - Guo, Xiang AU - Guo X FAU - Hu, Jing AU - Hu J FAU - Lv, Zhenling AU - Lv Z FAU - Han, Fangpu AU - Han F LA - eng SI - GENBANK/JF969286 PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20141231 PL - England TA - New Phytol JT - The New phytologist JID - 9882884 RN - 0 (Histones) RN - 0 (Plant Proteins) RN - 0 (Recombinant Proteins) SB - IM MH - Adaptation, Biological MH - Amino Acid Sequence MH - Biological Evolution MH - Centromere/genetics MH - Chromosomes, Plant/genetics MH - Genome, Plant/*genetics MH - Histones/*genetics MH - In Situ Hybridization, Fluorescence MH - Molecular Sequence Data MH - Phylogeny MH - Plant Leaves/genetics MH - Plant Proteins/genetics MH - Polyploidy MH - Recombinant Proteins MH - Selection, Genetic MH - Sequence Alignment MH - Triticum/*genetics OTO - NOTNLM OT - CENH3 OT - centromere OT - gene expression OT - polyploid OT - wheat (Triticum spp.) EDAT- 2015/01/06 06:00 MHDA- 2016/01/05 06:00 CRDT- 2015/01/06 06:00 PHST- 2014/09/27 00:00 [received] PHST- 2014/11/13 00:00 [accepted] PHST- 2015/01/06 06:00 [entrez] PHST- 2015/01/06 06:00 [pubmed] PHST- 2016/01/05 06:00 [medline] AID - 10.1111/nph.13235 [doi] PST - ppublish SO - New Phytol. 2015 Apr;206(2):839-51. doi: 10.1111/nph.13235. Epub 2014 Dec 31.