PMID- 25751063 OWN - NLM STAT- MEDLINE DCOM- 20150702 LR - 20240514 IS - 1558-8238 (Electronic) IS - 0021-9738 (Print) IS - 0021-9738 (Linking) VI - 125 IP - 4 DP - 2015 Apr TI - A versatile modular vector system for rapid combinatorial mammalian genetics. PG - 1603-19 LID - 79743 [pii] LID - 10.1172/JCI79743 [doi] AB - Here, we describe the multiple lentiviral expression (MuLE) system that allows multiple genetic alterations to be introduced simultaneously into mammalian cells. We created a toolbox of MuLE vectors that constitute a flexible, modular system for the rapid engineering of complex polycistronic lentiviruses, allowing combinatorial gene overexpression, gene knockdown, Cre-mediated gene deletion, or CRISPR/Cas9-mediated (where CRISPR indicates clustered regularly interspaced short palindromic repeats) gene mutation, together with expression of fluorescent or enzymatic reporters for cellular assays and animal imaging. Examples of tumor engineering were used to illustrate the speed and versatility of performing combinatorial genetics using the MuLE system. By transducing cultured primary mouse cells with single MuLE lentiviruses, we engineered tumors containing up to 5 different genetic alterations, identified genetic dependencies of molecularly defined tumors, conducted genetic interaction screens, and induced the simultaneous CRISPR/Cas9-mediated knockout of 3 tumor-suppressor genes. Intramuscular injection of MuLE viruses expressing oncogenic H-RasG12V together with combinations of knockdowns of the tumor suppressors cyclin-dependent kinase inhibitor 2A (Cdkn2a), transformation-related protein 53 (Trp53), and phosphatase and tensin homolog (Pten) allowed the generation of 3 murine sarcoma models, demonstrating that genetically defined autochthonous tumors can be rapidly generated and quantitatively monitored via direct injection of polycistronic MuLE lentiviruses into mouse tissues. Together, our results demonstrate that the MuLE system provides genetic power for the systematic investigation of the molecular mechanisms that underlie human diseases. FAU - Albers, Joachim AU - Albers J FAU - Danzer, Claudia AU - Danzer C FAU - Rechsteiner, Markus AU - Rechsteiner M FAU - Lehmann, Holger AU - Lehmann H FAU - Brandt, Laura P AU - Brandt LP FAU - Hejhal, Tomas AU - Hejhal T FAU - Catalano, Antonella AU - Catalano A FAU - Busenhart, Philipp AU - Busenhart P FAU - Goncalves, Ana Filipa AU - Goncalves AF FAU - Brandt, Simone AU - Brandt S FAU - Bode, Peter K AU - Bode PK FAU - Bode-Lesniewska, Beata AU - Bode-Lesniewska B FAU - Wild, Peter J AU - Wild PJ FAU - Frew, Ian J AU - Frew IJ LA - eng GR - 260316/ERC_/European Research Council/International PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20150309 PL - United States TA - J Clin Invest JT - The Journal of clinical investigation JID - 7802877 RN - 0 (CRISPR-Associated Proteins) RN - 0 (Hif1a protein, mouse) RN - 0 (Hypoxia-Inducible Factor 1, alpha Subunit) RN - 0 (RNA, Small Interfering) RN - 0 (Retinoblastoma Protein) RN - 0 (Tumor Suppressor Protein p53) RN - EC 3.1.3.67 (PTEN Phosphohydrolase) RN - EC 3.1.3.67 (PTEN protein, human) RN - N12000U13O (Doxycycline) SB - IM MH - Animals MH - Apoptosis MH - CRISPR-Associated Proteins/*genetics MH - *CRISPR-Cas Systems MH - Cells, Cultured MH - Cloning, Molecular/*methods MH - Clustered Regularly Interspaced Short Palindromic Repeats MH - Doxycycline/pharmacology MH - Drug Resistance/genetics MH - Gene Deletion MH - Gene Knockdown Techniques MH - *Genetic Vectors MH - Humans MH - Hypoxia-Inducible Factor 1, alpha Subunit/physiology MH - Lentivirus/*genetics MH - Mice MH - Mice, SCID MH - PTEN Phosphohydrolase/antagonists & inhibitors/genetics MH - RNA, Small Interfering/genetics MH - Recombination, Genetic MH - Retinoblastoma Protein/antagonists & inhibitors/genetics MH - Sarcoma, Experimental/genetics/therapy MH - Transduction, Genetic MH - Tumor Suppressor Protein p53/genetics MH - Xenograft Model Antitumor Assays PMC - PMC4396471 EDAT- 2015/03/10 06:00 MHDA- 2015/07/03 06:00 PMCR- 2015/07/01 CRDT- 2015/03/10 06:00 PHST- 2014/12/19 00:00 [received] PHST- 2015/01/20 00:00 [accepted] PHST- 2015/03/10 06:00 [entrez] PHST- 2015/03/10 06:00 [pubmed] PHST- 2015/07/03 06:00 [medline] PHST- 2015/07/01 00:00 [pmc-release] AID - 79743 [pii] AID - 10.1172/JCI79743 [doi] PST - ppublish SO - J Clin Invest. 2015 Apr;125(4):1603-19. doi: 10.1172/JCI79743. Epub 2015 Mar 9.