PMID- 25781606
OWN - NLM
STAT- MEDLINE
DCOM- 20160315
LR  - 20181113
IS  - 1932-6203 (Electronic)
IS  - 1932-6203 (Linking)
VI  - 10
IP  - 3
DP  - 2015
TI  - Transcriptome analysis of maize leaf systemic symptom infected by Bipolaris 
      zeicola.
PG  - e0119858
LID - 10.1371/journal.pone.0119858 [doi]
LID - e0119858
AB  - Bipolaris zeicola is a fungal pathogen that causes Northern corn leaf spot 
      (NCLS), which is a serious foliar disease in maize and one of the most 
      significant pathogens affecting global food security. Here, we report a 
      genome-wide transcriptional profile analysis using next-generation sequencing 
      (NGS) of maize leaf development after inoculation with B. zeicola. We performed 
      High-Throughput Digital Gene Expression analysis to identify differentially 
      expressed genes (DEGs) in resistant inbred Mo17 lines after infection with B. 
      zeicola at four successive disease development stages--CP (contact period), PP 
      (penetration period), IP (incubation period), and DP (disease period); the 
      expression of the genes was compared with those in a CK (mock-treatment) control. 
      In addition, a sensitive maize line (Zheng58) was used for the comparisons with 
      the Mo17. Among all tested genes, 466 differentially expressed genes were 
      identified in all libraries, and Kyoto Encyclopedia of Genes and Genomes (KEGG) 
      pathway analysis of these genes suggested that they are involved in many 
      biological processes related to systemic symptom development, such as plant 
      hormone signal transduction, starch and sucrose metabolism, phenylpropanoid 
      biosynthesis and photosynthesis. Our systematic analysis provides comprehensive 
      transcriptomic information regarding systemic symptom development in 
      fungal-infected plants. This information will help in furthering our 
      understanding of the detailed mechanisms of plant responses to fungal infection.
FAU - Liu, Ming
AU  - Liu M
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China; 
      School of Agricultural Sciences, Xichang College, Xichang, China.
FAU - Gao, Jian
AU  - Gao J
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China.
FAU - Yin, Fuqiang
AU  - Yin F
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China; 
      School of Agricultural Sciences, Xichang College, Xichang, China.
FAU - Gong, Guoshu
AU  - Gong G
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China.
FAU - Qin, Cheng
AU  - Qin C
AD  - Key Laboratory of Biology and Genetic Improvement of Maize in the Southwest 
      Region, Ministry of Agriculture; Maize Research Institute, Sichuan Agricultural 
      University, Wenjiang, Sichuan, China.
FAU - Ye, Kunhao
AU  - Ye K
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China.
FAU - Zhang, Min
AU  - Zhang M
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China.
FAU - Sun, Xiaofang
AU  - Sun X
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China.
FAU - Zhou, You
AU  - Zhou Y
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China.
FAU - Zhang, Youju
AU  - Zhang Y
AD  - College of Agricultural Science, Sichuan Agricultural University, Chengdu, China.
LA  - eng
SI  - SRA/SRA197274
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
DEP - 20150317
PL  - United States
TA  - PLoS One
JT  - PloS one
JID - 101285081
SB  - IM
MH  - Ascomycota/*physiology
MH  - Disease Resistance/genetics
MH  - Gene Expression Profiling
MH  - Gene Expression Regulation, Plant
MH  - Genome, Plant
MH  - Plant Diseases/microbiology
MH  - Plant Leaves/genetics/microbiology/physiology
MH  - Transcriptome
MH  - Zea mays/genetics/microbiology/*physiology
PMC - PMC4363367
COIS- Competing Interests: The authors have declared that no competing interests exist.
EDAT- 2015/03/18 06:00
MHDA- 2016/03/16 06:00
PMCR- 2015/03/17
CRDT- 2015/03/18 06:00
PHST- 2014/08/14 00:00 [received]
PHST- 2015/01/16 00:00 [accepted]
PHST- 2015/03/18 06:00 [entrez]
PHST- 2015/03/18 06:00 [pubmed]
PHST- 2016/03/16 06:00 [medline]
PHST- 2015/03/17 00:00 [pmc-release]
AID - PONE-D-14-33595 [pii]
AID - 10.1371/journal.pone.0119858 [doi]
PST - epublish
SO  - PLoS One. 2015 Mar 17;10(3):e0119858. doi: 10.1371/journal.pone.0119858. 
      eCollection 2015.