PMID- 26042602 OWN - NLM STAT- MEDLINE DCOM- 20160415 LR - 20211203 IS - 2159-3345 (Electronic) IS - 2159-3337 (Linking) VI - 25 IP - 4 DP - 2015 Aug TI - Effect of Polypurine Reverse Hoogsteen Hairpins on Relevant Cancer Target Genes in Different Human Cell Lines. PG - 198-208 AB - We studied the ability of polypurine reverse Hoogsteen hairpins (PPRHs) to silence a variety of relevant cancer-related genes in several human cell lines. PPRHs are hairpins formed by two antiparallel polypurine strands bound by intramolecular Hoogsteen bonds linked by a pentathymidine loop. These hairpins are able to bind to their target DNA sequence through Watson-Crick bonds producing specific silencing of gene expression. We designed PPRHs against the following genes: BCL2, TOP1, mTOR, MDM2, and MYC and tested them for mRNA levels, cytotoxicity, and apoptosis in prostate, pancreas, colon, and breast cancer cell lines. Even though all PPRHs were effective, the most remarkable results were obtained with those against BCL2 and mammalian target of rapamycin (mTOR) in decreasing cell survival and mRNA levels and increasing apoptosis in prostate, colon, and pancreatic cancer cells. In the case of TOP1, MDM2, and MYC, their corresponding PPRHs produced a strong effect in decreasing cell viability and mRNA levels and increasing apoptosis in breast cancer cells. Thus, we confirm that the PPRH technology is broadly useful to silence the expression of cancer-related genes as demonstrated using target genes involved in metabolism (DHFR), proliferation (mTOR), DNA topology (TOP1), lifespan and senescence (telomerase), apoptosis (survivin, BCL2), transcription factors (MYC), and proto-oncogenes (MDM2). FAU - Villalobos, Xenia AU - Villalobos X AD - Department of Biochemistry and Molecular Biology, School of Pharmacy, University of Barcelona , Barcelona, Spain . FAU - Rodriguez, Laura AU - Rodriguez L AD - Department of Biochemistry and Molecular Biology, School of Pharmacy, University of Barcelona , Barcelona, Spain . FAU - Sole, Anna AU - Sole A AD - Department of Biochemistry and Molecular Biology, School of Pharmacy, University of Barcelona , Barcelona, Spain . FAU - Lliberos, Carolina AU - Lliberos C AD - Department of Biochemistry and Molecular Biology, School of Pharmacy, University of Barcelona , Barcelona, Spain . FAU - Mencia, Nuria AU - Mencia N AD - Department of Biochemistry and Molecular Biology, School of Pharmacy, University of Barcelona , Barcelona, Spain . FAU - Ciudad, Carlos J AU - Ciudad CJ AD - Department of Biochemistry and Molecular Biology, School of Pharmacy, University of Barcelona , Barcelona, Spain . FAU - Noe, Veronique AU - Noe V AD - Department of Biochemistry and Molecular Biology, School of Pharmacy, University of Barcelona , Barcelona, Spain . LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20150604 PL - United States TA - Nucleic Acid Ther JT - Nucleic acid therapeutics JID - 101562758 RN - 0 (BCL2 protein, human) RN - 0 (MYC protein, human) RN - 0 (Proto-Oncogene Proteins c-bcl-2) RN - 0 (Proto-Oncogene Proteins c-myc) RN - 0 (RNA, Messenger) RN - 25086-81-1 (Poly T) RN - EC 2.3.2.27 (MDM2 protein, human) RN - EC 2.3.2.27 (Proto-Oncogene Proteins c-mdm2) RN - EC 2.7.1.1 (MTOR protein, human) RN - EC 2.7.11.1 (TOR Serine-Threonine Kinases) RN - EC 5.99.1.2 (DNA Topoisomerases, Type I) RN - EC 5.99.1.2 (TOP1 protein, human) SB - IM MH - Apoptosis/genetics MH - Base Pairing MH - Cell Line, Tumor MH - Cell Survival MH - DNA Topoisomerases, Type I/genetics/metabolism MH - Female MH - *Gene Silencing MH - *Genes, Neoplasm MH - Humans MH - *Inverted Repeat Sequences MH - Male MH - Poly T/*genetics/metabolism MH - Proto-Oncogene Proteins c-bcl-2/antagonists & inhibitors/genetics/metabolism MH - Proto-Oncogene Proteins c-mdm2/antagonists & inhibitors/genetics/metabolism MH - Proto-Oncogene Proteins c-myc/antagonists & inhibitors/genetics/metabolism MH - RNA, Messenger/*antagonists & inhibitors/genetics/metabolism MH - Signal Transduction MH - TOR Serine-Threonine Kinases/antagonists & inhibitors/genetics/metabolism EDAT- 2015/06/05 06:00 MHDA- 2016/04/16 06:00 CRDT- 2015/06/05 06:00 PHST- 2015/06/05 06:00 [entrez] PHST- 2015/06/05 06:00 [pubmed] PHST- 2016/04/16 06:00 [medline] AID - 10.1089/nat.2015.0531 [pii] AID - 10.1089/nat.2015.0531 [doi] PST - ppublish SO - Nucleic Acid Ther. 2015 Aug;25(4):198-208. doi: 10.1089/nat.2015.0531. Epub 2015 Jun 4.