PMID- 26432002
OWN - NLM
STAT- MEDLINE
DCOM- 20160318
LR  - 20151130
IS  - 1879-0038 (Electronic)
IS  - 0378-1119 (Linking)
VI  - 576
IP  - 1 Pt 1
DP  - 2016 Jan 15
TI  - A comparison of virus genome sequences with their host silkworm, Bombyx mori.
PG  - 60-3
LID - S0378-1119(15)01182-8 [pii]
LID - 10.1016/j.gene.2015.09.073 [doi]
AB  - With the recent availability of the genomes of many viruses and the silkworm, 
      Bombyx mori, as well as a variety of Basic Local Alignment Search Tool (BLAST) 
      programs, a new opportunity to gain insight into the interaction of viruses with 
      the silkworm is possible. This study aims to determine the possible existence of 
      sequence identities between the genomes of viruses and the silkworm and attempts 
      to explain this phenomenon. BLAST searches of the genomes of viruses against the 
      silkworm genome were performed using the resources of the National Center for 
      Biotechnology Information. All studied viruses contained variable numbers of 
      short regions with sequence identity to the genome of the silkworm. The short 
      regions of sequence identity in the genome of the silkworm may be derived from 
      the genomes of viruses in the long history of silkworm-virus interaction. This 
      study is the first to compare these genomes, and may contribute to research on 
      the interaction between viruses and the silkworm.
CI  - Copyright (c) 2015 Elsevier B.V. All rights reserved.
FAU - Tang, Xu-Dong
AU  - Tang XD
AD  - Jiangsu University of Science and Technology, Zhenjiang 212018, Jiangsu, China; 
      Sericultural Research Institute, Chinese Academy of Agricultural Sciences, 
      Zhenjiang 212018, Jiangsu, China; Key Laboratory of Genetic Improvement of 
      Silkworm and Mulberry of Agricultural Ministry, Zhenjiang 212003, Jiangsu, China. 
      Electronic address: xudongt@aliyun.com.
FAU - Yue, Ya-Jie
AU  - Yue YJ
AD  - Jiangsu University of Science and Technology, Zhenjiang 212018, Jiangsu, China; 
      Sericultural Research Institute, Chinese Academy of Agricultural Sciences, 
      Zhenjiang 212018, Jiangsu, China; Key Laboratory of Genetic Improvement of 
      Silkworm and Mulberry of Agricultural Ministry, Zhenjiang 212003, Jiangsu, China.
FAU - Wang, Wei
AU  - Wang W
AD  - Jiangsu University of Science and Technology, Zhenjiang 212018, Jiangsu, China; 
      Key Laboratory of Genetic Improvement of Silkworm and Mulberry of Agricultural 
      Ministry, Zhenjiang 212003, Jiangsu, China.
FAU - Li, Nan
AU  - Li N
AD  - Jiangsu University of Science and Technology, Zhenjiang 212018, Jiangsu, China; 
      Key Laboratory of Genetic Improvement of Silkworm and Mulberry of Agricultural 
      Ministry, Zhenjiang 212003, Jiangsu, China.
FAU - Shen, Zhong-Yuan
AU  - Shen ZY
AD  - Jiangsu University of Science and Technology, Zhenjiang 212018, Jiangsu, China; 
      Sericultural Research Institute, Chinese Academy of Agricultural Sciences, 
      Zhenjiang 212018, Jiangsu, China; Key Laboratory of Genetic Improvement of 
      Silkworm and Mulberry of Agricultural Ministry, Zhenjiang 212003, Jiangsu, China.
LA  - eng
PT  - Comparative Study
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
DEP - 20150930
PL  - Netherlands
TA  - Gene
JT  - Gene
JID - 7706761
SB  - IM
MH  - Animals
MH  - Bombyx/*genetics/virology
MH  - *Genome, Insect
MH  - *Genome, Viral
MH  - Insect Viruses/*genetics
MH  - *Sequence Alignment
OTO - NOTNLM
OT  - BLAST
OT  - Silkworm genome sequence
OT  - Virus disease
OT  - Virus-silkworm interaction
EDAT- 2015/10/04 06:00
MHDA- 2016/03/19 06:00
CRDT- 2015/10/04 06:00
PHST- 2015/07/21 00:00 [received]
PHST- 2015/08/30 00:00 [revised]
PHST- 2015/09/24 00:00 [accepted]
PHST- 2015/10/04 06:00 [entrez]
PHST- 2015/10/04 06:00 [pubmed]
PHST- 2016/03/19 06:00 [medline]
AID - S0378-1119(15)01182-8 [pii]
AID - 10.1016/j.gene.2015.09.073 [doi]
PST - ppublish
SO  - Gene. 2016 Jan 15;576(1 Pt 1):60-3. doi: 10.1016/j.gene.2015.09.073. Epub 2015 
      Sep 30.