PMID- 26446888 OWN - NLM STAT- MEDLINE DCOM- 20160517 LR - 20160104 IS - 1432-8798 (Electronic) IS - 0304-8608 (Linking) VI - 161 IP - 1 DP - 2016 Jan TI - Development of single-chain variable fragments (scFv) against influenza virus targeting hemagglutinin subunit 2 (HA2). PG - 19-31 LID - 10.1007/s00705-015-2625-6 [doi] AB - Influenza A viruses (IAV) are widespread in birds and domestic poultry, occasionally causing severe epidemics in humans and posing health threats. Hence, the need to develop a strategy for prophylaxis or therapy, such as a broadly neutralizing antibody against IAV, is urgent. In this study, single-chain variable fragment (scFv) phage display technology was used to select scFv fragments recognizing influenza envelope proteins. The Tomlinson I and J scFv phage display libraries were screened against the recombinant HA2 protein (rHA2) for three rounds. Only the third-round elution sample of the Tomlinson J library showed high binding affinity to rHA2, from which three clones (3JA18, 3JA62, and 3JA78) were chosen for preparative-scale production as soluble antibody by E. coli. The clone 3JA18 was selected for further tests due to its broad affinity for influenza H1N1, H3N2 and H5N1. Simulations of the scFv 3JA18-HA trimer complex revealed that the complementarity-determining region of the variable heavy chain (VH-CDR2) bound the stem region of HA. Neutralization assays using a peptide derived from VH-CDR2 also supported the simulation model. Both the selected antibody and its derived peptide were shown to suppress infection with H5N1 and H1N1 viruses, but not H3N2 viruses. The results also suggested that the scFvs selected from rHA2 could have neutralizing activity by interfering with the function of the HA stem region during virus entry into target cells. FAU - Li, Tai-Wei AU - Li TW AD - Institute of Chemistry, Academia Sinica, Taipei, Taiwan. FAU - Cheng, Shu-Fang AU - Cheng SF AD - Institute of Chemistry, Academia Sinica, Taipei, Taiwan. FAU - Tseng, Yen-Tzu AU - Tseng YT AD - Institute of Chemistry, Academia Sinica, Taipei, Taiwan. FAU - Yang, Yu-Chih AU - Yang YC AD - Agricultural Biotech Research Center, Academia Sinica, Taipei, Taiwan. FAU - Liu, Wen-Chun AU - Liu WC AD - Institute of Biotechnology, National Tsing Hua University, Hsinchu, Taiwan. FAU - Wang, Sheng-Cyuan AU - Wang SC AD - Institute of Chemistry, Academia Sinica, Taipei, Taiwan. FAU - Chou, Mei-Ju AU - Chou MJ AD - Institute of Chemistry, Academia Sinica, Taipei, Taiwan. FAU - Lin, Yu-Jen AU - Lin YJ AD - Institute of Chemistry, Academia Sinica, Taipei, Taiwan. FAU - Wang, Yueh AU - Wang Y AD - Institute of Epidemiology and Preventive Medicine, National Taiwan University, Taipei, Taiwan. FAU - Hsiao, Pei-Wen AU - Hsiao PW AD - Agricultural Biotech Research Center, Academia Sinica, Taipei, Taiwan. FAU - Wu, Suh-Chin AU - Wu SC AD - Institute of Biotechnology, National Tsing Hua University, Hsinchu, Taiwan. FAU - Chang, Ding-Kwo AU - Chang DK AD - Institute of Chemistry, Academia Sinica, Taipei, Taiwan. dkc@chem.sinica.edu.tw. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20151008 PL - Austria TA - Arch Virol JT - Archives of virology JID - 7506870 RN - 0 (Antibodies, Neutralizing) RN - 0 (Hemagglutinin Glycoproteins, Influenza Virus) RN - 0 (Immunoglobulin Fc Fragments) RN - 0 (Single-Chain Antibodies) SB - IM MH - Antibodies, Neutralizing/genetics/immunology MH - Antibody Specificity MH - Hemagglutinin Glycoproteins, Influenza Virus/*immunology MH - Humans MH - Immunoglobulin Fc Fragments/genetics/*immunology MH - Influenza A Virus, H1N1 Subtype/genetics/*immunology MH - Influenza A Virus, H3N2 Subtype/genetics/*immunology MH - Influenza A Virus, H5N1 Subtype/genetics/*immunology MH - Influenza, Human/immunology/*virology MH - Single-Chain Antibodies/genetics/*immunology EDAT- 2015/10/09 06:00 MHDA- 2016/05/18 06:00 CRDT- 2015/10/09 06:00 PHST- 2015/06/24 00:00 [received] PHST- 2015/09/23 00:00 [accepted] PHST- 2015/10/09 06:00 [entrez] PHST- 2015/10/09 06:00 [pubmed] PHST- 2016/05/18 06:00 [medline] AID - 10.1007/s00705-015-2625-6 [pii] AID - 10.1007/s00705-015-2625-6 [doi] PST - ppublish SO - Arch Virol. 2016 Jan;161(1):19-31. doi: 10.1007/s00705-015-2625-6. Epub 2015 Oct 8.