PMID- 26543079 OWN - NLM STAT- MEDLINE DCOM- 20160912 LR - 20151106 IS - 1790-6245 (Electronic) IS - 1109-6535 (Linking) VI - 12 IP - 6 DP - 2015 Nov-Dec TI - Oligo-based High-resolution aCGH Analysis Enhances Routine Cytogenetic Diagnostics in Haematological Malignancies. PG - 301-37 AB - BACKGROUND: The purpose of the present study was to evaluate the detection rate of genomic aberrations in haematological malignancies using oligobased array-CGH (oaCGH) analysis in combination with karyotyping and fluorescence in situ hybridization (FISH) analyses, and its feasibility in a clinical pragmatic approach. MATERIALS AND METHODS: The 4x180K Cancer Cytochip array was applied in 96 patients with various haematological malignancies in a prospective setting and in 41 acute myeloid leukemia (AML) patients retrospectively. RESULTS: Combined use of oaCGH analysis and karyotyping improved the overall detection rate in comparison to karyotyping-alone and vice versa. In cases with normal karyotypes oaCGH analysis detected genomic aberrations in 66% (39/60) of cases. In the group of simple karyotypes oaCGH analysis extended karyotypic findings in 39% (12/31) while oaCGH analysis extended the karyotypic findings in 89% (39/44) of cases with complex karyotypes. In 7% (5/75) of cases oaCGH analysis failed in detecting the observed abnormalities by karyotyping. CONCLUSION: oaCGH analysis is a valuable asset in routine cytogenetics of haematological malignancies. CI - Copyright(c) 2015, International Institute of Anticancer Research (Dr. John G. Delinasios), All rights reserved. FAU - Kjeldsen, Eigil AU - Kjeldsen E AD - HaemoDiagnostic Laboratory, Cancer Cytogenetics Section, Department of Hematology, Aarhus University Hospital, Aarhus, Denmark Eigil.Kjeldsen@clin.au.dk. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - Greece TA - Cancer Genomics Proteomics JT - Cancer genomics & proteomics JID - 101188791 SB - IM MH - Adult MH - Aged MH - Aged, 80 and over MH - Chromosome Aberrations MH - Chromosome Banding MH - *Comparative Genomic Hybridization MH - Cytogenetics/*methods MH - Female MH - Gene Rearrangement MH - Hematologic Neoplasms/*diagnosis/*genetics MH - Humans MH - In Situ Hybridization, Fluorescence MH - Karyotyping MH - Leukemia, Myeloid, Acute/*diagnosis/*genetics MH - Male MH - Middle Aged MH - Oligonucleotide Array Sequence Analysis MH - Prospective Studies MH - Retrospective Studies OTO - NOTNLM OT - FISH OT - Haematological malignancy OT - aCGH OT - chromothripsis OT - karyotyping EDAT- 2015/11/07 06:00 MHDA- 2016/09/13 06:00 CRDT- 2015/11/07 06:00 PHST- 2015/11/07 06:00 [entrez] PHST- 2015/11/07 06:00 [pubmed] PHST- 2016/09/13 06:00 [medline] AID - 12/6/301 [pii] PST - ppublish SO - Cancer Genomics Proteomics. 2015 Nov-Dec;12(6):301-37.