PMID- 26683811 OWN - NLM STAT- MEDLINE DCOM- 20161213 LR - 20210816 IS - 1944-9917 (Electronic) IS - 0888-8809 (Print) IS - 0888-8809 (Linking) VI - 30 IP - 3 DP - 2016 Mar TI - Tissue-Specific Expression of Estrogen Receptor 1 Is Regulated by DNA Methylation in a T-DMR. PG - 335-47 LID - 10.1210/me.2015-1058 [doi] AB - The mechanism controlling tissue-specific expression of estrogen receptor 1 (ESR1) is unclear. In other genes, DNA methylation of a region called the tissue-dependent and differentially methylated region (T-DMR) has been associated with tissue-specific gene expression. This study investigated whether human ESR1 has a T-DMR and whether DNA methylation of the T-DMR regulates its expression. ESR1 expression was tissue-specific, being high in the endometrium and mammary gland and low/nil in the placenta and skin. Therefore, DNA methylation profiles of the promoter of ESR1 were analyzed in these tissues and in breast cancer tissues. In all of the normal tissues, the proximal promoter regions were unmethylated. On the other hand, the distal regions (T-DMR) were unmethylated in the endometrium and mammary gland, but were moderately methylated and hypermethylated in the placenta and skin, respectively. T-DMR-methylated reporter assay was performed to examine whether DNA methylation at the T-DMR suppresses ESR1 transcription. T-DMR, but not the promoter region, had transcriptional activities and DNA methylation of the T-DMR suppressed ESR1 transcription. Early growth response protein 1 was shown to be a possible transcription factor to bind the T-DMR and up-regulate ESR1 expression. ESR1 has several upstream exons, and each upstream exon, Exon-A/Exon-B/Exon-C, had its own T-DMR. In some breast cancer cases and breast cancer cell lines, ESR1 expression was not regulated by DNA methylation at T-DMR as it is in normal tissues. In conclusion, ESR1 has a T-DMR. DNA methylation status at the T-DMR is involved in tissue-specific ESR1 expression in normal tissues but not always in breast cancer. FAU - Maekawa, Ryo AU - Maekawa R AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Sato, Shun AU - Sato S AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Okada, Maki AU - Okada M AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Lee, Lifa AU - Lee L AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Tamura, Isao AU - Tamura I AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Jozaki, Kosuke AU - Jozaki K AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Kajimura, Takuya AU - Kajimura T AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Asada, Hiromi AU - Asada H AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Yamagata, Yoshiaki AU - Yamagata Y AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Tamura, Hiroshi AU - Tamura H AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Yamamoto, Shigeru AU - Yamamoto S AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. FAU - Sugino, Norihiro AU - Sugino N AD - Departments of Obstetrics and Gynecology (R.M., S.S., M.O., L.L., I.T., K.J., T.K., H.A., Y.Y., H.T., N.S.) and Digestive Surgery and Surgical Oncology (S.Y.), Yamaguchi University Graduate School of Medicine, Ube 755-8505, Japan. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20151218 PL - United States TA - Mol Endocrinol JT - Molecular endocrinology (Baltimore, Md.) JID - 8801431 RN - 0 (ESR1 protein, human) RN - 0 (Estrogen Receptor alpha) RN - 0 (Histones) RN - 0 (RNA, Messenger) RN - 0 (Transcription Factors) SB - IM MH - Base Sequence MH - Breast Neoplasms/genetics MH - DNA Methylation/*genetics MH - Estrogen Receptor alpha/*genetics/metabolism MH - Exons/genetics MH - Female MH - Gene Expression Regulation, Neoplastic MH - Genes, Reporter MH - Histones/metabolism MH - Humans MH - MCF-7 Cells MH - Organ Specificity/*genetics MH - Promoter Regions, Genetic MH - Protein Binding MH - Protein Processing, Post-Translational MH - RNA, Messenger/genetics/metabolism MH - Transcription Factors/metabolism PMC - PMC5414650 EDAT- 2015/12/20 06:00 MHDA- 2016/12/15 06:00 PMCR- 2017/03/01 CRDT- 2015/12/20 06:00 PHST- 2015/12/20 06:00 [entrez] PHST- 2015/12/20 06:00 [pubmed] PHST- 2016/12/15 06:00 [medline] PHST- 2017/03/01 00:00 [pmc-release] AID - ME-15-1058 [pii] AID - 10.1210/me.2015-1058 [doi] PST - ppublish SO - Mol Endocrinol. 2016 Mar;30(3):335-47. doi: 10.1210/me.2015-1058. Epub 2015 Dec 18.