PMID- 26819262 OWN - NLM STAT- MEDLINE DCOM- 20180119 LR - 20220311 IS - 1477-0970 (Electronic) IS - 1352-4585 (Linking) VI - 22 IP - 13 DP - 2016 Nov TI - Genetic loci for Epstein-Barr virus nuclear antigen-1 are associated with risk of multiple sclerosis. PG - 1655-1664 AB - BACKGROUND: Infection with the Epstein-Barr virus (EBV) is associated with an increased risk of multiple sclerosis (MS). OBJECTIVE: We sought genetic loci influencing EBV nuclear antigen-1 (EBNA-1) IgG titers and hypothesized that they may play a role in MS risk. METHODS: We performed a genome-wide association study (GWAS) of anti-EBNA-1 IgG titers in 3599 individuals from an unselected twin family cohort, followed by a meta-analysis with data from an independent EBNA-1 GWAS. We then examined the shared polygenic risk between the EBNA-1 GWAS (effective sample size (N(eff)) = 5555) and a large MS GWAS (N(eff) = 15,231). RESULTS: We identified one locus of strong association within the human leukocyte antigen (HLA) region, of which the most significantly associated genotyped single nucleotide polymorphism (SNP) was rs2516049 (p = 4.11 x 10(-9)). A meta-analysis including data from another EBNA-1 GWAS in a cohort of Mexican-American families confirmed that rs2516049 remained the most significantly associated SNP (p = 3.32 x 10(-20)). By examining the shared polygenic risk, we show that the genetic risk for elevated anti-EBNA-1 titers is positively correlated with the development of MS, and that elevated EBNA-1 titers are not an epiphenomena secondary to MS. In the joint meta-analysis of EBNA-1 titers and MS, loci at 1p22.1, 3p24.1, 3q13.33, and 10p15.1 reached genome-wide significance (p < 5 x 10(-8)). CONCLUSIONS: Our results suggest that apart from the confirmed HLA region, the association of anti-EBNA-1 IgG titer with MS risk is also mediated through non-HLA genes, and that studies aimed at identifying genetic loci influencing EBNA immune response provides a novel opportunity to identify new and characterize existing genetic risk factors for MS. CI - (c) The Author(s), 2016. FAU - Zhou, Yuan AU - Zhou Y AD - Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS, Australia. FAU - Zhu, Gu AU - Zhu G AD - Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia. FAU - Charlesworth, Jac C AU - Charlesworth JC AD - Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS, Australia. FAU - Simpson, Steve Jr AU - Simpson S Jr AD - Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS, Australia. FAU - Rubicz, Rohina AU - Rubicz R AD - Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA, USA. FAU - Goring, Harald Hh AU - Goring HH AD - South Texas Diabetes and Obesity Institute, University of Texas Rio Grande Valley School of Medicine, Brownsville, TX, USA. FAU - Patsopoulos, Nikolaos A AU - Patsopoulos NA AD - Program in Translational NeuroPsychiatric Genomics, Institute for the Neurosciences, Department of Neurology, Brigham and Women's Hospital, Boston, MA, USA/Harvard Medical School, Boston, MA, USA/Broad Institute, Cambridge, MA, USA. FAU - Laverty, Caroline AU - Laverty C AD - Monash Antibody Technologies Facility, Monash University, Melbourne, VIC, Australia. FAU - Wu, Feitong AU - Wu F AD - Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS, Australia. FAU - Henders, Anjali AU - Henders A AD - Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia. FAU - Ellis, Jonathan J AU - Ellis JJ AD - Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia. FAU - van der Mei, Ingrid AU - van der Mei I AD - Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS, Australia. FAU - Montgomery, Grant W AU - Montgomery GW AD - Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia. FAU - Blangero, John AU - Blangero J AD - South Texas Diabetes and Obesity Institute, University of Texas Rio Grande Valley School of Medicine, Brownsville, TX, USA. FAU - Curran, Joanne E AU - Curran JE AD - South Texas Diabetes and Obesity Institute, University of Texas Rio Grande Valley School of Medicine, Brownsville, TX, USA. FAU - Johnson, Matthew P AU - Johnson MP AD - South Texas Diabetes and Obesity Institute, University of Texas Rio Grande Valley School of Medicine, Brownsville, TX, USA. FAU - Martin, Nicholas G AU - Martin NG AD - Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia. FAU - Nyholt, Dale R AU - Nyholt DR AD - Statistical and Genomic Epidemiology Laboratory, Institute of Health and Biomedical Innovation, Queensland University of Technology, Brisbane, QLD, Australia/Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia. FAU - Taylor, Bruce V AU - Taylor BV AD - Menzies Institute for Medical Research, University of Tasmania, Hobart, TAS, Australia Bruce.Taylor@utas.edu.au. CN - ANZgene consortium LA - eng GR - R01 HL080149/HL/NHLBI NIH HHS/United States PT - Journal Article PT - Meta-Analysis PT - Twin Study DEP - 20160127 PL - England TA - Mult Scler JT - Multiple sclerosis (Houndmills, Basingstoke, England) JID - 9509185 RN - 0 (Epstein-Barr Virus Nuclear Antigens) RN - O5GA75RST7 (EBV-encoded nuclear antigen 1) SB - IM MH - *Epstein-Barr Virus Nuclear Antigens MH - Genetic Loci MH - *Genome-Wide Association Study MH - Humans MH - Multiple Sclerosis/*etiology MH - Risk OTO - NOTNLM OT - EBNA-1 OT - Epstein-Barr virus OT - GWAS OT - multiple sclerosis OT - non-HLA OT - polygenic risk EDAT- 2016/01/29 06:00 MHDA- 2018/01/20 06:00 CRDT- 2016/01/29 06:00 PHST- 2015/07/17 00:00 [received] PHST- 2015/12/02 00:00 [accepted] PHST- 2016/01/29 06:00 [pubmed] PHST- 2018/01/20 06:00 [medline] PHST- 2016/01/29 06:00 [entrez] AID - 1352458515626598 [pii] AID - 10.1177/1352458515626598 [doi] PST - ppublish SO - Mult Scler. 2016 Nov;22(13):1655-1664. doi: 10.1177/1352458515626598. Epub 2016 Jan 27.