PMID- 27331112
OWN - NLM
STAT- PubMed-not-MEDLINE
DCOM- 20160622
LR  - 20200930
IS  - 2352-3409 (Print)
IS  - 2352-3409 (Electronic)
IS  - 2352-3409 (Linking)
VI  - 8
DP  - 2016 Sep
TI  - Proteomic dataset for altered glycoprotein expression upon GALNT3 knockdown in 
      ovarian cancer cells.
PG  - 342-9
LID - 10.1016/j.dib.2016.05.060 [doi]
AB  - This article contains raw and processed data related to research published in 
      "Role of the polypeptide N-acetylgalactosaminyltransferase 3 in ovarian cancer 
      progression: possible implications in abnormal mucin O-glycosylation" [1]. The 
      data presented here was obtained with the application of a bioorthogonal chemical 
      reporter strategy analyzing differential glycoprotein expression following the 
      knock-down (KD) of the GALNT3 gene in the epithelial ovarian cancer (EOC) cell 
      line A2780s. LC-MS/MS mass spectrometry analysis was then performed and the 
      processed data related to the identified glycoproteins show that several hundred 
      proteins are differentially expressed between control and GALNT3 KD A2780s cells. 
      The obtained data also uncover numerous novel glycoproteins; some of which could 
      represent new potential EOC biomarkers and/or therapeutic targets.
FAU - Sheta, Razan
AU  - Sheta R
AD  - Department of Molecular Medicine, Laval University, Quebec PQ, Canada; Centre de 
      recherche du CHU de Quebec, L'Hotel-Dieu de Quebec, Quebec PQ, Canada.
FAU - Roux-Dalvai, Florence
AU  - Roux-Dalvai F
AD  - Centre de recherche du CHU de Quebec, CHUL, Quebec PQ, Canada.
FAU - Woo, Christina M
AU  - Woo CM
AD  - Department of Chemistry, Stanford University, Stanford, CA, USA.
FAU - Fournier, Frederic
AU  - Fournier F
AD  - Centre de recherche du CHU de Quebec, CHUL, Quebec PQ, Canada.
FAU - Bourassa, Sylvie
AU  - Bourassa S
AD  - Centre de recherche du CHU de Quebec, CHUL, Quebec PQ, Canada.
FAU - Bertozzi, Carolyn R
AU  - Bertozzi CR
AD  - Department of Chemistry, Stanford University, Stanford, CA, USA; Howard Hughes 
      Medical Institute, Stanford University, Stanford, CA, USA.
FAU - Droit, Arnaud
AU  - Droit A
AD  - Department of Molecular Medicine, Laval University, Quebec PQ, Canada; Centre de 
      recherche du CHU de Quebec, CHUL, Quebec PQ, Canada.
FAU - Bachvarov, Dimcho
AU  - Bachvarov D
AD  - Department of Molecular Medicine, Laval University, Quebec PQ, Canada; Centre de 
      recherche du CHU de Quebec, L'Hotel-Dieu de Quebec, Quebec PQ, Canada.
LA  - eng
GR  - R01 CA200423/CA/NCI NIH HHS/United States
PT  - Journal Article
DEP - 20160530
PL  - Netherlands
TA  - Data Brief
JT  - Data in brief
JID - 101654995
PMC - PMC4908283
OTO - NOTNLM
OT  - Ac4GalNAz labeling
OT  - GALNT3
OT  - Glycoproteomics
OT  - Glycosylation
OT  - Label free quantification
OT  - NetOGlyc and NetNGlyc prediction analysis
EDAT- 2016/06/23 06:00
MHDA- 2016/06/23 06:01
PMCR- 2016/05/30
CRDT- 2016/06/23 06:00
PHST- 2016/04/19 00:00 [received]
PHST- 2016/05/12 00:00 [revised]
PHST- 2016/05/24 00:00 [accepted]
PHST- 2016/06/23 06:00 [entrez]
PHST- 2016/06/23 06:00 [pubmed]
PHST- 2016/06/23 06:01 [medline]
PHST- 2016/05/30 00:00 [pmc-release]
AID - S2352-3409(16)30348-1 [pii]
AID - 10.1016/j.dib.2016.05.060 [doi]
PST - epublish
SO  - Data Brief. 2016 May 30;8:342-9. doi: 10.1016/j.dib.2016.05.060. eCollection 2016 
      Sep.