PMID- 27577400 OWN - NLM STAT- MEDLINE DCOM- 20170428 LR - 20170428 IS - 1879-8365 (Electronic) IS - 0926-9630 (Linking) VI - 228 DP - 2016 TI - Automatic Extraction of Drug Adverse Effects from Product Characteristics (SPCs): A Text Versus Table Comparison. PG - 339-43 AB - BACKGROUND: Potential adverse effects (AEs) of drugs are described in their summary of product characteristics (SPCs), a textual document. Automatic extraction of AEs from SPCs is useful for detecting AEs and for building drug databases. However, this task is difficult because each AE is associated with a frequency that must be extracted and the presentation of AEs in SPCs is heterogeneous, consisting of plain text and tables in many different formats. METHODS: We propose a taxonomy for the presentation of AEs in SPCs. We set up natural language processing (NLP) and table parsing methods for extracting AEs from texts and tables of any format, and evaluate them on 10 SPCs. RESULTS: Automatic extraction performed better on tables than on texts. CONCLUSION: Tables should be recommended for the presentation of the AEs section of the SPCs. FAU - Lamy, Jean-Baptiste AU - Lamy JB AD - LIMICS, Universite Paris 13, Sorbonne Paris Cite, 93017 Bobigny, France, INSERM UMRS 1142, UPMC Universite Paris 6, Sorbonne Universites, Paris. FAU - Ugon, Adrien AU - Ugon A AD - LIMICS, Universite Paris 13, Sorbonne Paris Cite, 93017 Bobigny, France, INSERM UMRS 1142, UPMC Universite Paris 6, Sorbonne Universites, Paris. FAU - Berthelot, Helene AU - Berthelot H AD - LIMICS, Universite Paris 13, Sorbonne Paris Cite, 93017 Bobigny, France, INSERM UMRS 1142, UPMC Universite Paris 6, Sorbonne Universites, Paris. LA - eng PT - Comparative Study PT - Journal Article PL - Netherlands TA - Stud Health Technol Inform JT - Studies in health technology and informatics JID - 9214582 MH - *Automation MH - *Drug-Related Side Effects and Adverse Reactions MH - Humans MH - *Information Storage and Retrieval MH - Natural Language Processing MH - Product Surveillance, Postmarketing MH - Software EDAT- 2016/09/01 06:00 MHDA- 2017/04/30 06:00 CRDT- 2016/09/01 06:00 PHST- 2016/09/01 06:00 [entrez] PHST- 2016/09/01 06:00 [pubmed] PHST- 2017/04/30 06:00 [medline] PST - ppublish SO - Stud Health Technol Inform. 2016;228:339-43.