PMID- 28174603 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20200930 IS - 1755-8166 (Print) IS - 1755-8166 (Electronic) IS - 1755-8166 (Linking) VI - 10 DP - 2017 TI - MLPA analysis in a cohort of patients with autism. PG - 2 LID - 10.1186/s13039-017-0302-z [doi] LID - 2 AB - BACKGROUND: Autism is a global neurodevelopmental disorder which generally manifests during the first 2 years and continues throughout life, with a range of symptomatic variations. Epidemiological studies show an important role of genetic factors in autism and several susceptible regions and genes have been identified. The aim of our study was to validate a cost-effective set of commercial Multiplex Ligation dependent Probe Amplification (MLPA) and methylation specific multiplex ligation dependent probe amplification (MS-MLPA) test in autistic children refered by the neurodevelopmental center and autism unit of a Paediatric Hospital. RESULTS: In this study 150 unrelated children with autism spectrum disorders were analysed for copy number variation in specific regions of chromosomes 15, 16 and 22, using MLPA. All the patients had been previously studied by conventional karyotype and fluorescence in situ hybridization (FISH) analysis for 15(q11.2q13) and, with these techniques, four alterations were identified. The MLPA technique confirmed these four and identified further six alterations by the combined application of the two different panels. CONCLUSIONS: Our data show that MLPA is a cost effective straightforward and rapid method for detection of imbalances in a clinically characterized population with autism. It contributes to strengthen the relationship between genotype and phenotype of children with autism, showing the clinical difference between deletions and duplications. FAU - Peixoto, Sara AU - Peixoto S AD - Cytogenetics and Genomics Laboratory, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c AD - Neurodevelopmental and Autism Unit from Child Developmental Center and Centro de Investigacao e Formacao Clinica, Hospital Pediatrico, Centro Hospitalar e Universitario de Coimbra, Coimbra, Portugal. ISNI: 0000000106861985. GRID: grid.28911.33 AD - Department of Paediatrics of the Centro Hospitalar de Tras-os-Montes e Alto Douro, EPE, Vila Real, Portugal. FAU - Melo, Joana B AU - Melo JB AD - Cytogenetics and Genomics Laboratory, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c AD - CNC.IBILI, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c AD - CIMAGO - Centro Investigacao em Meio Ambiente, Genetica e Oncobiologia, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c FAU - Ferrao, Jose AU - Ferrao J AD - Cytogenetics and Genomics Laboratory, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c FAU - Pires, Luis M AU - Pires LM AD - Cytogenetics and Genomics Laboratory, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c FAU - Lavoura, Nuno AU - Lavoura N AD - Cytogenetics and Genomics Laboratory, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c FAU - Pinto, Marta AU - Pinto M AD - Cytogenetics and Genomics Laboratory, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c FAU - Oliveira, Guiomar AU - Oliveira G AD - Neurodevelopmental and Autism Unit from Child Developmental Center and Centro de Investigacao e Formacao Clinica, Hospital Pediatrico, Centro Hospitalar e Universitario de Coimbra, Coimbra, Portugal. ISNI: 0000000106861985. GRID: grid.28911.33 AD - University Clinic of Pediatrics and Institute for Biomedical Imaging and Life Science, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c FAU - Carreira, Isabel M AU - Carreira IM AD - Cytogenetics and Genomics Laboratory, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c AD - CNC.IBILI, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c AD - CIMAGO - Centro Investigacao em Meio Ambiente, Genetica e Oncobiologia, Faculty of Medicine, University of Coimbra, Coimbra, Portugal. ISNI: 0000 0000 9511 4342. GRID: grid.8051.c LA - eng PT - Journal Article DEP - 20170204 PL - England TA - Mol Cytogenet JT - Molecular cytogenetics JID - 101317942 PMC - PMC5292146 OTO - NOTNLM OT - Autism OT - Autism spectrum disorders OT - Copy number variants OT - Genotype OT - Methylation Specific Multiplex Ligation-dependent Probe Amplification (MS-MLPA) OT - Multiplex Ligation-dependent Probe Amplification (MLPA) OT - Phenotype EDAT- 2017/02/09 06:00 MHDA- 2017/02/09 06:01 PMCR- 2017/02/04 CRDT- 2017/02/09 06:00 PHST- 2016/09/16 00:00 [received] PHST- 2017/01/04 00:00 [accepted] PHST- 2017/02/09 06:00 [entrez] PHST- 2017/02/09 06:00 [pubmed] PHST- 2017/02/09 06:01 [medline] PHST- 2017/02/04 00:00 [pmc-release] AID - 302 [pii] AID - 10.1186/s13039-017-0302-z [doi] PST - epublish SO - Mol Cytogenet. 2017 Feb 4;10:2. doi: 10.1186/s13039-017-0302-z. eCollection 2017.