PMID- 28423874 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20201001 IS - 1011-2367 (Print) IS - 1976-5517 (Electronic) IS - 1011-2367 (Linking) VI - 30 IP - 12 DP - 2017 Dec TI - The relationship between the variants in the 5'-untranslated regions of equine chorionic gonadotropin genes and serum equine chorionic gonadotropin levels. PG - 1679-1683 LID - 10.5713/ajas.17.0133 [doi] AB - OBJECTIVE: An experiment was conducted to study the association between the single nucleotide polymorphisms (SNPs) in 5'-untranslated regions (5'-UTR) of equine chorionic gonadotropin (eCG) genes and the serum eCG levels. METHODS: SNPs in 5'-UTR of eCG genes were screened across 10 horse breeds, including 7 Chinese indigenous breeds and 3 imported breeds using iPLEX chemistry, and the association between the serum eCG levels of 174 pregnant Da'an mares and their serum eCG levels (determined with ELISA) was analyzed. RESULTS: Four SNPs were identified in the 5'-UTR of the eCGalpha gene, and one of them was unique in the indigenous breeds. There were 2 SNPs detected at the 5' end of the eCGbeta subunit gene, and one of them was only found in the Chinese breeds. The SNP g.39948246T>C at the 5'-UTR of eCGalpha was associated significantly with eCG levels of 75-day pregnant mare serum (p<0.05) in Da'an mares. Prediction analysis on binding sites of transcription factors showed that the g.39948246T>C mutation causes appearance of the specific binding site of hepatocyte nuclear factor 3 forkhead homolog 2 (HFH-2), which is a transcriptional repressor belonging to the forkhead protein family of transcription factors. CONCLUSION: The SNP g.39948246T>C at the 5'-UTR of eCGalpha is associated with eCG levels of 75-day pregnant mare serum (p<0.05). FAU - Liu, ShuQin AU - Liu S AD - Equine Center, China Agricultural University, Beijing 100193, China. FAU - Lian, Song AU - Lian S AD - College of Animal Science and Technology, China Agricultural University, Beijing 100193, China. FAU - Yang, YunZhou AU - Yang Y AD - Equine Center, China Agricultural University, Beijing 100193, China. FAU - Fu, ChunZheng AU - Fu C AD - Equine Center, China Agricultural University, Beijing 100193, China. FAU - Ma, HongYing AU - Ma H AD - Equine Center, China Agricultural University, Beijing 100193, China. FAU - Xiong, ZhiYao AU - Xiong Z AD - Equine Center, China Agricultural University, Beijing 100193, China. FAU - Ling, Yao AU - Ling Y AD - College of Animal Science and Technology, China Agricultural University, Beijing 100193, China. FAU - Zhao, ChunJiang AU - Zhao C AD - Equine Center, China Agricultural University, Beijing 100193, China. AD - College of Animal Science and Technology, China Agricultural University, Beijing 100193, China. AD - Key Laboratory of Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, 100193, China. AD - National Engineering Laboratory for Animal Breeding, Beijing 100193, China. LA - eng PT - Journal Article DEP - 20170419 PL - Korea (South) TA - Asian-Australas J Anim Sci JT - Asian-Australasian journal of animal sciences JID - 9884245 PMC - PMC5666169 OTO - NOTNLM OT - Equine Chorionic Gonadotropin (eCG) OT - Single Nucleotide Polymorphism (SNP) OT - Transcription Factor COIS- CONFLICT OF INTEREST We certify that there is no conflict of interest with any financial organization regarding the material discussed in the manuscript. EDAT- 2017/04/21 06:00 MHDA- 2017/04/21 06:01 PMCR- 2017/12/01 CRDT- 2017/04/21 06:00 PHST- 2017/02/15 00:00 [received] PHST- 2017/03/23 00:00 [revised] PHST- 2017/03/30 00:00 [accepted] PHST- 2017/04/21 06:00 [pubmed] PHST- 2017/04/21 06:01 [medline] PHST- 2017/04/21 06:00 [entrez] PHST- 2017/12/01 00:00 [pmc-release] AID - ajas.17.0133 [pii] AID - ajas-30-12-1679 [pii] AID - 10.5713/ajas.17.0133 [doi] PST - ppublish SO - Asian-Australas J Anim Sci. 2017 Dec;30(12):1679-1683. doi: 10.5713/ajas.17.0133. Epub 2017 Apr 19.