PMID- 28644959 OWN - NLM STAT- MEDLINE DCOM- 20180420 LR - 20181113 IS - 1879-2472 (Electronic) IS - 0049-3848 (Print) IS - 0049-3848 (Linking) VI - 156 DP - 2017 Aug TI - Generation and characterization of aptamers targeting factor XIa. PG - 134-141 LID - S0049-3848(17)30379-1 [pii] LID - 10.1016/j.thromres.2017.06.015 [doi] AB - BACKGROUND: The plasma protease factor XIa (FXIa) has become a target of interest for therapeutics designed to prevent or treat thrombotic disorders. METHODS: We used a solution-based, directed evolution approach called systematic evolution of ligands by exponential enrichment (SELEX) to isolate RNA aptamers that target the FXIa catalytic domain. RESULTS: Two aptamers, designated 11.16 and 12.7, were identified that bound to previously identified anion binding and serpin bindings sites on the FXIa catalytic domain. The aptamers were non-competitive inhibitors of FXIa cleavage of a tripeptide chromogenic substrate and of FXIa activation of factor IX. In normal human plasma, aptamer 12.7 significantly prolonged the aPTT clotting time. CONCLUSIONS: The results show that novel inhibitors of FXIa can be prepared using SELEX techniques. RNA aptamers can bind to distinct sites on the FXIa catalytic domain and noncompetitively inhibit FXIa activity toward its primary macromolecular substrate factor IX with different levels of potency. Such compounds can be developed for use as therapeutic inhibitors. CI - Copyright (c) 2017 Elsevier Ltd. All rights reserved. FAU - Woodruff, R S AU - Woodruff RS AD - Department of Surgery, Duke University Medical Center, Durham, NC, United States; University Program in Genetics and Genomics, Duke University, Durham, NC, United States. FAU - Ivanov, I AU - Ivanov I AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, TN, United States. FAU - Verhamme, I M AU - Verhamme IM AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, TN, United States. FAU - Sun, M-F AU - Sun MF AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, TN, United States. FAU - Gailani, D AU - Gailani D AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, TN, United States. FAU - Sullenger, B A AU - Sullenger BA AD - Department of Surgery, Duke University Medical Center, Durham, NC, United States. Electronic address: bruce.sullenger@duke.edu. LA - eng GR - U54 HL112307/HL/NHLBI NIH HHS/United States GR - R01 HL058837/HL/NHLBI NIH HHS/United States GR - R01 GM116184/GM/NIGMS NIH HHS/United States GR - R01 HL065222/HL/NHLBI NIH HHS/United States GR - R01 HL081326/HL/NHLBI NIH HHS/United States PT - Journal Article DEP - 20170609 PL - United States TA - Thromb Res JT - Thrombosis research JID - 0326377 RN - 0 (Anticoagulants) RN - 0 (Aptamers, Nucleotide) RN - EC 3.4.21.27 (Factor XIa) SB - IM CIN - Thromb Res. 2017 Aug;156:198. PMID: 28739204 MH - Anticoagulants/*metabolism MH - Aptamers, Nucleotide/*metabolism MH - Factor XIa/*metabolism MH - Humans PMC - PMC5697752 MID - NIHMS920337 OTO - NOTNLM OT - Anticoagulant agents OT - Blood coagulation OT - Factor IX OT - Factor XIa OT - RNA aptamers COIS- Conflict of interest: Dr. Sullenger reports founding equity from Regado Biosciences/Tobira, outside the submitted work; In addition, Dr. Sullenger has a patent issued broadly relevant to the submitted work. Dr. Gailani reports grants from National Institutes of Health HL58837, HL81326, GM116184, a member of the advisory board of Aronora, grants and personal fees from Bayer, grants and personal fees from Dyax, personal fees from Ionis, personal fees from Merck, personal fees from Novartis, grants and personal fees from Ono, outside the submitted work; In addition, Dr. Gailani has a patent U.S. Patent Application No. 13/140,115 with royalties paid. EDAT- 2017/06/24 06:00 MHDA- 2018/04/21 06:00 PMCR- 2018/08/01 CRDT- 2017/06/24 06:00 PHST- 2017/02/01 00:00 [received] PHST- 2017/05/04 00:00 [revised] PHST- 2017/06/08 00:00 [accepted] PHST- 2017/06/24 06:00 [pubmed] PHST- 2018/04/21 06:00 [medline] PHST- 2017/06/24 06:00 [entrez] PHST- 2018/08/01 00:00 [pmc-release] AID - S0049-3848(17)30379-1 [pii] AID - 10.1016/j.thromres.2017.06.015 [doi] PST - ppublish SO - Thromb Res. 2017 Aug;156:134-141. doi: 10.1016/j.thromres.2017.06.015. Epub 2017 Jun 9.