PMID- 28748349 OWN - NLM STAT- MEDLINE DCOM- 20171113 LR - 20181113 IS - 1432-2307 (Electronic) IS - 0945-6317 (Linking) VI - 471 IP - 5 DP - 2017 Nov TI - Desmoplastic small round cell tumor: evaluation of reverse transcription-polymerase chain reaction and fluorescence in situ hybridization as ancillary molecular diagnostic techniques. PG - 631-640 LID - 10.1007/s00428-017-2207-y [doi] AB - Desmoplastic small round cell tumor (DSRCT) is a rare, biologically aggressive soft tissue neoplasm of uncertain differentiation, most often arising in the abdominal and pelvic cavities of adolescents and young adults with a striking male predominance. Histologically, it is characterized by islands of uniform small round cells in prominent desmoplastic stroma, and it has a polyimmunophenotypic profile, typically expressing WT1 and cytokeratin, desmin, and neural/neuroendocrine differentiation markers to varying degrees. Tumors at other sites and with variant morphology are more rarely described. DSRCT is associated with a recurrent t(11;22)(p13;q12) translocation, leading to the characteristic EWSR1-WT1 gene fusion. Fluorescence in situ hybridization (FISH), to detect EWSR1 rearrangement, and reverse transcription-polymerase chain reaction (RT-PCR) to assess for EWSR1-WT1 fusion transcripts are routine diagnostic ancillary tools. We present a large institutional comparative series of FISH and RT-PCR for DSRCT diagnosis. Twenty-six specimens (from 25 patients) histologically diagnosed as DSRCT were assessed for EWSR1 rearrangement and EWSR1-WT1 fusion transcripts. Of these 26 specimens, 24 yielded positive results with either FISH or RT-PCR or both. FISH was performed in 23 samples, with EWSR1 rearrangement seen in 21 (91.3%). RT-PCR was performed in 18 samples, of which 13 (72.2%) harbored EWSR1-WT1 fusion transcripts. The sensitivity of FISH in detecting DSRCT was 91.3%, and that of RT-PCR was 92.8% following omission of four technical failures. Therefore, both methods are comparable in terms of sensitivity. FISH is more sensitive if technical failures for RT-PCR are taken into account, and RT-PCR is more specific in confirming DSRCT. Both methods complement each other by confirming cases that the other method may not. In isolation, FISH is a relatively non-specific diagnostic adjunct due to the number of different neoplasms that can harbor EWSR1 rearrangement, such as Ewing sarcoma. However, in cases with appropriate morphology and a typical pattern of immunostaining, FISH is confirmatory of the diagnosis. FAU - Mohamed, Mustafa AU - Mohamed M AD - Sarcoma Unit, The Royal Marsden NHS Foundation Trust, 203 Fulham Road, London, SW3 6JJ, UK. FAU - Gonzalez, David AU - Gonzalez D AD - Molecular Diagnostics, Royal Marsden Hospital, Surrey, Sutton, UK. FAU - Fritchie, Karen J AU - Fritchie KJ AD - Divisions of Anatomic Pathology and Laboratory Medicine & Pathology, Mayo Clinic, Rochester, MN, USA. FAU - Swansbury, John AU - Swansbury J AD - Clinical Cytogenetics, Royal Marsden Hospital, Surrey, Sutton, UK. FAU - Wren, Dorte AU - Wren D AD - Molecular Diagnostics, Royal Marsden Hospital, Surrey, Sutton, UK. FAU - Benson, Charlotte AU - Benson C AD - Sarcoma Unit, The Royal Marsden NHS Foundation Trust, 203 Fulham Road, London, SW3 6JJ, UK. FAU - Jones, Robin L AU - Jones RL AD - Sarcoma Unit, The Royal Marsden NHS Foundation Trust, 203 Fulham Road, London, SW3 6JJ, UK. FAU - Fisher, Cyril AU - Fisher C AD - Sarcoma Unit, The Royal Marsden NHS Foundation Trust, 203 Fulham Road, London, SW3 6JJ, UK. FAU - Thway, Khin AU - Thway K AD - Sarcoma Unit, The Royal Marsden NHS Foundation Trust, 203 Fulham Road, London, SW3 6JJ, UK. khin.thway@rmh.nhs.uk. LA - eng PT - Journal Article DEP - 20170726 PL - Germany TA - Virchows Arch JT - Virchows Archiv : an international journal of pathology JID - 9423843 RN - 0 (Calmodulin-Binding Proteins) RN - 0 (EWS1-WT1 fusion protein, human) RN - 0 (EWSR1 protein, human) RN - 0 (Oncogene Proteins, Fusion) RN - 0 (RNA-Binding Protein EWS) RN - 0 (RNA-Binding Proteins) SB - IM MH - Adolescent MH - Adult MH - Calmodulin-Binding Proteins/analysis/genetics MH - Child MH - Desmoplastic Small Round Cell Tumor/*diagnosis/genetics MH - Female MH - Humans MH - In Situ Hybridization, Fluorescence/*methods MH - Male MH - Middle Aged MH - Oncogene Proteins, Fusion/analysis/genetics MH - RNA-Binding Protein EWS MH - RNA-Binding Proteins/analysis/genetics MH - Reverse Transcriptase Polymerase Chain Reaction/*methods MH - Young Adult OTO - NOTNLM OT - Desmoplastic small round cell tumor OT - Fluorescence in situ hybridization OT - Reverse transcription-polymerase chain reaction OT - Sarcoma EDAT- 2017/07/28 06:00 MHDA- 2017/11/14 06:00 CRDT- 2017/07/28 06:00 PHST- 2017/04/07 00:00 [received] PHST- 2017/07/18 00:00 [accepted] PHST- 2017/06/17 00:00 [revised] PHST- 2017/07/28 06:00 [pubmed] PHST- 2017/11/14 06:00 [medline] PHST- 2017/07/28 06:00 [entrez] AID - 10.1007/s00428-017-2207-y [pii] AID - 10.1007/s00428-017-2207-y [doi] PST - ppublish SO - Virchows Arch. 2017 Nov;471(5):631-640. doi: 10.1007/s00428-017-2207-y. Epub 2017 Jul 26.