PMID- 28869107 OWN - NLM STAT- MEDLINE DCOM- 20180801 LR - 20180801 IS - 1618-0631 (Electronic) IS - 0344-0338 (Linking) VI - 213 IP - 11 DP - 2017 Nov TI - Molecular characterization of a series of solitary fibrous tumors, including immunohistochemical expression of STAT6 and NATB2-STAT6 fusion transcripts, using Reverse Transcriptase(RT)-Polymerase chain reaction(PCR) technique: An Indian experience. PG - 1404-1411 LID - S0344-0338(17)30687-8 [pii] LID - 10.1016/j.prp.2017.08.011 [doi] AB - A solitary fibrous tumor (SFT) is characterized by a diverse clinicopathologic spectrum. Recent studies have unraveled STAT6 as a useful diagnostic immunohistochemical (IHC) marker for a SFT and NAB2-STAT6 as its specific gene fusion transcript. Thirty-three SFTs were tested for STAT6 immunostaining by polymer detection technique. STAT6 immunoexpression was further graded, based on intensity (mild, moderate and strong) and percentage of immunopositive tumor cells, ranging from 1 to 25%(1+); 26-50%(2+); 51-75%(3+) and in more than 75%(4+) tumor nuclei. These cases along with 17 other tumors were tested for 8 variants of NAB2-STAT6, using qualitative endpoint reverse-transcriptase (RT)-PCR technique. RNA extraction was performed using Recover All Total nucleic acid extraction kit. The selected cases were screened for all the 8 fusion variants, using 8 primer pairs for NAB2 and STAT6 genes. Thirty-three SFTs occurred in 18 men and 15 women (M: F=1.2:1), with age varying from 13 to 74 years(average=49.6); across various body sites. Immunohistochemically, most SFTs (30/33) (90.9%) displayed moderate to strong immunostaining for STAT6, including 3+ and 4+ immunostaining patterns in 27/33 (81.8%) tumors. By RT-PCR, 30/33(90.9%) cases of SFT were positive for NAB2-STAT6 fusions, including NAB2ex4/STAT6ex2 (7cases), NAB2ex7/STAT6ex2 (7cases), NAB2ex6/STAT6ex3 (6cases), NAB2ex6/SAT6ex16 (4cases), NAB2ex3/STAT6ex19 (4cases), NAB2ex6/STAT6ex17 (single case), NAB2ex4/STAT6ex4 (single case) and NAB2ex6/STAT6ex18 (none). NAB2-STAT6 fusions were not observed in 9 cases of synovial sarcoma, 4 of Ewing sarcoma, 2 of MPNST and 2 cases of dedifferentiated liposarcomas (100% specificity). On comparing with clinical outcomes, more cases (7/11)(63.6%) of classic SFT were associated with favorable outcomes, while more cases(5/8)(62%) of atypical and malignant SFTs were associated with aggressive outcomes. This study reinforces high sensitivity and specificity of NAB2-STAT6 fusion and its correlation with strong and diffuse IHC expression of STAT6 in a SFT, irrespective of its occurrence in various body sites and its histopathologic types. NAB2ex4-STAT6ex2 and NAB2ex7-STAT6ex2 fusions were relatively more frequently observed in our patients. Atypical and malignant SFTs, together, were more frequently associated with relatively aggressive clinical outcomes. CI - Copyright (c) 2017 Elsevier GmbH. All rights reserved. FAU - Rekhi, Bharat AU - Rekhi B AD - Department of Surgical Pathology, Tata Memorial Centre, Mumbai, Maharashtra, India; Division of Molecular Pathology, Department of Pathology, Tata Memorial Centre, Mumbai, Maharashtra, India. Electronic address: rekhi.bharat@gmail.com. FAU - Shetty, Omshree AU - Shetty O AD - Division of Molecular Pathology, Department of Pathology, Tata Memorial Centre, Mumbai, Maharashtra, India. FAU - Tripathi, Parul AU - Tripathi P AD - Department of Surgical Pathology, Tata Memorial Centre, Mumbai, Maharashtra, India. FAU - Bapat, Prachi AU - Bapat P AD - Division of Molecular Pathology, Department of Pathology, Tata Memorial Centre, Mumbai, Maharashtra, India. FAU - Ramadwar, Mukta AU - Ramadwar M AD - Department of Surgical Pathology, Tata Memorial Centre, Mumbai, Maharashtra, India; Division of Molecular Pathology, Department of Pathology, Tata Memorial Centre, Mumbai, Maharashtra, India. FAU - Bajpai, Jyoti AU - Bajpai J AD - Department of Medical Oncology, Tata Memorial Centre, Mumbai, Maharashtra, India. FAU - Puri, Ajay AU - Puri A AD - Department of Surgical Oncology (Bone and Soft Tissues), Tata Memorial Centre, Mumbai, Maharashtra, India. LA - eng PT - Journal Article DEP - 20170826 PL - Germany TA - Pathol Res Pract JT - Pathology, research and practice JID - 7806109 RN - 0 (Biomarkers, Tumor) RN - 0 (Oncogene Proteins, Fusion) RN - 0 (STAT6 Transcription Factor) RN - 0 (STAT6 protein, human) RN - EC 2.7.7.49 (RNA-Directed DNA Polymerase) SB - IM MH - Adolescent MH - Adult MH - Aged MH - Biomarkers, Tumor/genetics MH - Female MH - Gene Fusion/*genetics MH - Humans MH - Immunohistochemistry/methods MH - Male MH - Middle Aged MH - Oncogene Proteins, Fusion/*genetics MH - RNA-Directed DNA Polymerase/genetics MH - Reverse Transcriptase Polymerase Chain Reaction/methods MH - STAT6 Transcription Factor/*genetics MH - Solitary Fibrous Tumors/*genetics/*pathology MH - Young Adult OTO - NOTNLM OT - Hemangiopericytoma OT - Molecular diagnosis in soft tissue tumors OT - NAB2-STAT6 OT - STAT6 OT - Solitary fibrous tumor EDAT- 2017/09/05 06:00 MHDA- 2018/08/02 06:00 CRDT- 2017/09/05 06:00 PHST- 2017/07/04 00:00 [received] PHST- 2017/07/29 00:00 [revised] PHST- 2017/08/20 00:00 [accepted] PHST- 2017/09/05 06:00 [pubmed] PHST- 2018/08/02 06:00 [medline] PHST- 2017/09/05 06:00 [entrez] AID - S0344-0338(17)30687-8 [pii] AID - 10.1016/j.prp.2017.08.011 [doi] PST - ppublish SO - Pathol Res Pract. 2017 Nov;213(11):1404-1411. doi: 10.1016/j.prp.2017.08.011. Epub 2017 Aug 26.