PMID- 28877583
OWN - NLM
STAT- MEDLINE
DCOM- 20180124
LR  - 20220129
IS  - 2161-5063 (Electronic)
IS  - 2161-5063 (Linking)
VI  - 6
IP  - 12
DP  - 2017 Dec 15
TI  - Leaf LIMS: A Flexible Laboratory Information Management System with a Synthetic 
      Biology Focus.
PG  - 2273-2280
LID - 10.1021/acssynbio.7b00212 [doi]
AB  - This paper presents Leaf LIMS, a flexible laboratory information management 
      system (LIMS) designed to address the complexity of synthetic biology workflows. 
      At the project's inception there was a lack of a LIMS designed specifically to 
      address synthetic biology processes, with most systems focused on either next 
      generation sequencing or biobanks and clinical sample handling. Leaf LIMS 
      implements integrated project, item, and laboratory stock tracking, offering 
      complete sample and construct genealogy, materials and lot tracking, and modular 
      assay data capture. Hence, it enables highly configurable task-based workflows 
      and supports data capture from project inception to completion. As such, in 
      addition to it supporting synthetic biology it is ideal for many laboratory 
      environments with multiple projects and users. The system is deployed as a web 
      application through Docker and is provided under a permissive MIT license. It is 
      freely available for download at https://leaflims.github.io .
FAU - Craig, Thomas
AU  - Craig T
AUID- ORCID: 0000-0001-7029-310X
AD  - GeneMill, University of Liverpool , Liverpool L69 7ZB, U.K.
FAU - Holland, Richard
AU  - Holland R
AD  - New Forest Ventures Ltd. , Fordingbridge SP6 1QX, U.K.
FAU - D'Amore, Rosalinda
AU  - D'Amore R
AD  - Centre for Genomic Research, University of Liverpool , Liverpool L69 7ZB, U.K.
FAU - Johnson, James R
AU  - Johnson JR
AD  - GeneMill, University of Liverpool , Liverpool L69 7ZB, U.K.
FAU - McCue, Hannah V
AU  - McCue HV
AD  - GeneMill, University of Liverpool , Liverpool L69 7ZB, U.K.
FAU - West, Anthony
AU  - West A
AD  - Earlham Institute , Norwich Research Park Innovation Centre, Colney Lane, Norwich 
      NR4 7UH, U.K.
FAU - Zulkower, Valentin
AU  - Zulkower V
AD  - Edinburgh Genome Foundry , Michael Swann Building, Max Born Crescent, Edinburgh 
      EH9 3BF, U.K.
FAU - Tekotte, Hille
AU  - Tekotte H
AD  - Edinburgh Genome Foundry , Michael Swann Building, Max Born Crescent, Edinburgh 
      EH9 3BF, U.K.
FAU - Cai, Yizhi
AU  - Cai Y
AD  - Edinburgh Genome Foundry , Michael Swann Building, Max Born Crescent, Edinburgh 
      EH9 3BF, U.K.
FAU - Swan, Daniel
AU  - Swan D
AUID- ORCID: 0000-0001-8978-8129
AD  - Earlham Institute , Norwich Research Park Innovation Centre, Colney Lane, Norwich 
      NR4 7UH, U.K.
FAU - Davey, Robert P
AU  - Davey RP
AD  - Earlham Institute , Norwich Research Park Innovation Centre, Colney Lane, Norwich 
      NR4 7UH, U.K.
FAU - Hertz-Fowler, Christiane
AU  - Hertz-Fowler C
AD  - Centre for Genomic Research, University of Liverpool , Liverpool L69 7ZB, U.K.
FAU - Hall, Anthony
AU  - Hall A
AD  - Earlham Institute , Norwich Research Park Innovation Centre, Colney Lane, Norwich 
      NR4 7UH, U.K.
FAU - Caddick, Mark
AU  - Caddick M
AD  - GeneMill, University of Liverpool , Liverpool L69 7ZB, U.K.
LA  - eng
GR  - BB/M00029X/1/BB_/Biotechnology and Biological Sciences Research Council/United 
      Kingdom
GR  - BB/M00094X/1/BB_/Biotechnology and Biological Sciences Research Council/United 
      Kingdom
GR  - BB/M025659/1/BB_/Biotechnology and Biological Sciences Research Council/United 
      Kingdom
GR  - BB/M005690/1/BB_/Biotechnology and Biological Sciences Research Council/United 
      Kingdom
GR  - BB/M025640/1/BB_/Biotechnology and Biological Sciences Research Council/United 
      Kingdom
PT  - Journal Article
PT  - Research Support, Non-U.S. Gov't
DEP - 20170913
PL  - United States
TA  - ACS Synth Biol
JT  - ACS synthetic biology
JID - 101575075
SB  - IM
MH  - *Database Management Systems
MH  - *Databases, Factual
MH  - *Synthetic Biology/instrumentation/methods
OTO - NOTNLM
OT  - LIMS
OT  - automation
OT  - data management
OT  - lab information management system
OT  - synthetic biology
EDAT- 2017/09/08 06:00
MHDA- 2018/01/25 06:00
CRDT- 2017/09/08 06:00
PHST- 2017/09/08 06:00 [pubmed]
PHST- 2018/01/25 06:00 [medline]
PHST- 2017/09/08 06:00 [entrez]
AID - 10.1021/acssynbio.7b00212 [doi]
PST - ppublish
SO  - ACS Synth Biol. 2017 Dec 15;6(12):2273-2280. doi: 10.1021/acssynbio.7b00212. Epub 
      2017 Sep 13.