PMID- 29618278 OWN - NLM STAT- MEDLINE DCOM- 20190506 LR - 20200306 IS - 2472-6311 (Electronic) IS - 2472-6303 (Print) IS - 2472-6303 (Linking) VI - 23 IP - 6 DP - 2018 Dec TI - Automated Preparation of MS-Sensitive Fluorescently Labeled N-Glycans with a Commercial Pipetting Robot. PG - 550-559 LID - 10.1177/2472630318762384 [doi] AB - N-Glycan analysis is routinely performed for biotherapeutic protein characterization. A recently introduced N-glycan analysis kit using RapiFluor-MS (RFMS) labeling provides time savings over reductive amination labeling methods while also providing enhanced fluorescence (FLR) and mass spectrometry (MS) responses. This article demonstrates the semiautomation of this kit using an Andrew Alliance pipetting robot that promises further gains in productivity. This robotic platform uses standard manual pipettors and an optically guided arm to facilitate the automation of manual procedures. The manual RFMS protocol includes two heating and cooling steps during protein denaturation and de-N-glycosylation. However, the current Andrew Alliance automated platform cannot move reaction tubes to and from different heating blocks. As a result, samples prepared using the automated procedure remain in a computer-controlled Peltier effect heating block, requiring reoptimization of denaturation and de-N-glycosylation temperatures. Using hydrophilic interaction liquid chromatography to monitor the RFMS-labeled glycan profiles, the authors demonstrated the reproducibility of the automated protocol with percent relative standard deviations (RSDs) of 9%-19% for the total area and 0.8%-20% for the relative areas of major and minor glycoforms. Overall, the automated platform presented here proves to be a convenient and reliable solution for N-glycan preparation and analysis. FAU - Reed, Corey E AU - Reed CE AD - 1 Waters Corporation, Milford, MA, USA. FAU - Fournier, Jennifer AU - Fournier J AD - 1 Waters Corporation, Milford, MA, USA. FAU - Vamvoukas, Nikolaos AU - Vamvoukas N AD - 2 Andrew Alliance, Geneva, Switzerland. FAU - Koza, Stephan M AU - Koza SM AD - 1 Waters Corporation, Milford, MA, USA. LA - eng PT - Journal Article DEP - 20180404 PL - United States TA - SLAS Technol JT - SLAS technology JID - 101697564 RN - 0 (Fluorescent Dyes) RN - 0 (Polysaccharides) RN - 0 (Proteins) SB - IM MH - Automation, Laboratory/*methods MH - Fluorescent Dyes/metabolism MH - Mass Spectrometry/instrumentation/*methods MH - Polysaccharides/*analysis MH - Proteins/*chemistry MH - Reproducibility of Results MH - Robotics/*instrumentation MH - Staining and Labeling/instrumentation/*methods PMC - PMC6249649 OTO - NOTNLM OT - N-glycan analysis OT - UPLC OT - automation OT - semiautomation COIS- Declaration of Conflicting Interests: The authors disclosed the following potential conflicts of interest with respect to the research, authorship, and/or publication of this article: All authors are employees of Waters Corporation or Andrew Alliance. Waters Corporation manufactures the GlycoWorks with RFMS kits and liquid chromatography systems used in the research presented here. Andrew Alliance manufactures the Andrew pipetting robot used in this research. The authors declared no other potential conflicts of interest with respect to the research, authorship, and/or publication of this article. EDAT- 2018/04/06 06:00 MHDA- 2019/05/07 06:00 PMCR- 2018/11/22 CRDT- 2018/04/06 06:00 PHST- 2018/04/06 06:00 [pubmed] PHST- 2019/05/07 06:00 [medline] PHST- 2018/04/06 06:00 [entrez] PHST- 2018/11/22 00:00 [pmc-release] AID - 10.1177_2472630318762384 [pii] AID - 10.1177/2472630318762384 [doi] PST - ppublish SO - SLAS Technol. 2018 Dec;23(6):550-559. doi: 10.1177/2472630318762384. Epub 2018 Apr 4.