PMID- 29733654 OWN - NLM STAT- MEDLINE DCOM- 20190610 LR - 20190613 IS - 1535-3907 (Electronic) IS - 1535-3893 (Linking) VI - 17 IP - 6 DP - 2018 Jun 1 TI - Identification of Immune-Responsive Gene 1 (IRG1) as a Target of A20. PG - 2182-2191 LID - 10.1021/acs.jproteome.8b00139 [doi] AB - A20 is a negative regulator of NF-kappaB signaling; it controls inflammatory responses and ensures tissue homeostasis. A20 is thought to restrict NF-kappaB activation both by its ubiquitin-editing activity as well as by its nonenzymatic activities. Besides its role in NF-kappaB signaling, A20 also acts as a protective factor inhibiting apoptosis and necroptosis. Because of the ability of A20 to both ubiquitinate and deubiquitinate substrates, and its involvement in many cellular processes, we hypothesized that deletion of A20 might generally impact on protein levels, thereby disrupting cellular signaling. We performed a differential proteomics study on bone marrow-derived macrophages (BMDMs) from control and myeloid-specific A20 knockout mice, both in untreated conditions and after LPS or TNF treatment, and demonstrated A20-dependent changes in protein expression. Several inflammatory proteins were found up-regulated in the absence of A20, even without an inflammatory stimulus, but, depending on the treatment and the treatment time, more proteins were found regulated. Together these protein changes may affect normal signaling events, which may disturb tissue homeostasis and induce (autoimmune) inflammation, in agreement with A20s proposed identity as a susceptibility gene for inflammatory disease. We further verify that immune-responsive gene 1 (IRG1) is up-regulated in the absence of A20 and that its levels are transcriptionally regulated. FAU - Van Quickelberghe, Emmy AU - Van Quickelberghe E AD - VIB-UGent Center for Medical Biotechnology, B-9000 Ghent , Belgium. FAU - Martens, Arne AU - Martens A AD - VIB-UGent Center for Inflammation Research, B-9052 Ghent , Belgium. AD - Department of Biomedical Molecular Biology , Ghent University , B-9052 Ghent , Belgium. FAU - Goeminne, Ludger J E AU - Goeminne LJE AD - VIB-UGent Center for Medical Biotechnology, B-9000 Ghent , Belgium. FAU - Clement, Lieven AU - Clement L FAU - van Loo, Geert AU - van Loo G AD - VIB-UGent Center for Inflammation Research, B-9052 Ghent , Belgium. AD - Department of Biomedical Molecular Biology , Ghent University , B-9052 Ghent , Belgium. FAU - Gevaert, Kris AU - Gevaert K AUID- ORCID: 0000-0002-4237-0283 AD - VIB-UGent Center for Medical Biotechnology, B-9000 Ghent , Belgium. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20180511 PL - United States TA - J Proteome Res JT - Journal of proteome research JID - 101128775 RN - 0 (Lipopolysaccharides) RN - 0 (Tumor Necrosis Factor-alpha) RN - EC 3.4.19.12 (Tumor Necrosis Factor alpha-Induced Protein 3) RN - EC 3.4.22.- (Tnfaip3 protein, mouse) RN - EC 4.2.1.- (Hydro-Lyases) RN - EC 4.2.1.79 (Irg1 protein, mouse) SB - IM MH - Animals MH - Gene Expression Regulation/drug effects MH - Hydro-Lyases/antagonists & inhibitors/*metabolism MH - Lipopolysaccharides/pharmacology MH - Macrophages/metabolism MH - Mice MH - Mice, Knockout MH - Proteomics/*methods MH - Transcription, Genetic MH - Tumor Necrosis Factor alpha-Induced Protein 3/*deficiency/physiology MH - Tumor Necrosis Factor-alpha/pharmacology MH - Up-Regulation OTO - NOTNLM OT - A20 OT - CAD OT - IRG1 OT - TNFAIP3 OT - bone marrow-derived macrophages OT - differential proteomics EDAT- 2018/05/08 06:00 MHDA- 2019/06/14 06:00 CRDT- 2018/05/08 06:00 PHST- 2018/05/08 06:00 [pubmed] PHST- 2019/06/14 06:00 [medline] PHST- 2018/05/08 06:00 [entrez] AID - 10.1021/acs.jproteome.8b00139 [doi] PST - ppublish SO - J Proteome Res. 2018 Jun 1;17(6):2182-2191. doi: 10.1021/acs.jproteome.8b00139. Epub 2018 May 11.