PMID- 29845350
OWN - NLM
STAT- MEDLINE
DCOM- 20180913
LR  - 20180913
IS  - 1432-8798 (Electronic)
IS  - 0304-8608 (Linking)
VI  - 163
IP  - 10
DP  - 2018 Oct
TI  - Phylogenetic analysis of porcine reproductive and respiratory syndrome virus 
      isolates from Northern Ireland.
PG  - 2799-2804
LID - 10.1007/s00705-018-3886-7 [doi]
AB  - To investigate the genetic diversity of porcine reproductive and respiratory 
      syndrome virus (PRRSV) in Northern Ireland, the ORF5 gene from nine field 
      isolates was sequenced and phylogenetically analysed. The results revealed 
      relatively high diversity amongst isolates, with 87.6-92.2% identity between 
      farms at the nucleotide level and 84.1-93.5% identity at the protein level. 
      Phylogenetic analysis confirmed that all nine isolates belonged to the European 
      (type 1) genotype and formed a cluster within the subtype 1 subgroup. This study 
      provides the first report on PRRSV isolate diversity in Northern Ireland.
FAU - Smith, Natalie
AU  - Smith N
AD  - Veterinary Science Division, Agri-Food and Biosciences Institute, Stormont, 
      Belfast, BT4 3SD, UK.
AD  - Centre for Experimental Medicine, School of Medicine, Dentistry and Biomedical 
      Sciences, Medical Biology Centre, Queen's University Belfast, Belfast, BT9 7BL, 
      UK.
FAU - Power, Ultan F
AU  - Power UF
AD  - Centre for Experimental Medicine, School of Medicine, Dentistry and Biomedical 
      Sciences, Medical Biology Centre, Queen's University Belfast, Belfast, BT9 7BL, 
      UK.
FAU - McKillen, John
AU  - McKillen J
AD  - Veterinary Science Division, Agri-Food and Biosciences Institute, Stormont, 
      Belfast, BT4 3SD, UK. john.mckillen@afbini.gov.uk.
LA  - eng
PT  - Journal Article
DEP - 20180529
PL  - Austria
TA  - Arch Virol
JT  - Archives of virology
JID - 7506870
RN  - 0 (Viral Envelope Proteins)
SB  - IM
MH  - Animals
MH  - Genetic Variation
MH  - Genotype
MH  - Northern Ireland
MH  - *Phylogeny
MH  - Porcine Reproductive and Respiratory Syndrome/*virology
MH  - Porcine respiratory and reproductive syndrome 
      virus/*classification/genetics/*isolation & purification
MH  - Swine
MH  - Viral Envelope Proteins/genetics
EDAT- 2018/05/31 06:00
MHDA- 2018/09/14 06:00
CRDT- 2018/05/31 06:00
PHST- 2018/02/13 00:00 [received]
PHST- 2018/05/17 00:00 [accepted]
PHST- 2018/05/31 06:00 [pubmed]
PHST- 2018/09/14 06:00 [medline]
PHST- 2018/05/31 06:00 [entrez]
AID - 10.1007/s00705-018-3886-7 [pii]
AID - 10.1007/s00705-018-3886-7 [doi]
PST - ppublish
SO  - Arch Virol. 2018 Oct;163(10):2799-2804. doi: 10.1007/s00705-018-3886-7. Epub 2018 
      May 29.