PMID- 29986579 OWN - NLM STAT- MEDLINE DCOM- 20191223 LR - 20191223 IS - 1948-7193 (Electronic) IS - 1948-7193 (Linking) VI - 9 IP - 11 DP - 2018 Nov 21 TI - The Inhibitory Effect of Hydroxylated Carbon Nanotubes on the Aggregation of Human Islet Amyloid Polypeptide Revealed by a Combined Computational and Experimental Study. PG - 2741-2752 LID - 10.1021/acschemneuro.8b00166 [doi] AB - Fibrillar deposits formed by the aggregation of the human islet amyloid polypeptide (hIAPP) are the major pathological hallmark of type 2 diabetes mellitus (T2DM). Inhibiting the aggregation of hIAPP is considered the primary therapeutic strategy for the treatment of T2DM. Hydroxylated carbon nanoparticles have received great attention in impeding amyloid protein fibrillation owing to their reduced cytotoxicity compared to the pristine ones. In this study, we investigated the influence of hydroxylated single-walled carbon nanotubes (SWCNT-OHs) on the first step of hIAPP aggregation: dimerization by performing explicit solvent replica exchange molecular dynamics (REMD) simulations. Extensive REMD simulations demonstrate that SWCNT-OHs can dramatically inhibit interpeptide beta-sheet formation and completely suppress the previously reported beta-hairpin amyloidogenic precursor of hIAPP. On the basis of our simulation results, we proposed that SWCNT-OH can hinder hIAPP fibrillation. This was further confirmed by our systematic turbidity measurements, thioflavin T fluorescence, circular dichroism (CD), transmission electron microscope (TEM), and atomic force microscopy (AFM) experiments. Detailed analyses of hIAPP-SWCNT-OH interactions reveal that hydrogen bonding, van der Waals, and pi-stacking interactions between hIAPP and SWCNT-OH significantly weaken the inter- and intrapeptide interactions that are crucial for beta-sheet formation. Our collective computational and experimental data reveal not only the inhibitory effect but also the inhibitory mechanism of SWCNT-OH against hIAPP aggregation, thus providing new clues for the development of future drug candidates against T2DM. FAU - Mo, Yuxiang AU - Mo Y AD - State Key Laboratory of Surface Physics, Key Laboratory for Computational Physical Science (Ministry of Education), Collaborative Innovation Center of Advanced Microstructures, and Department of Physics , Fudan University , Shanghai 200433 , People's Republic of China. AD - College of Physical Science and Technology , Guangxi Normal University , 15 Yucai Road , Guilin 541004 , People's Republic of China. FAU - Brahmachari, Sayanti AU - Brahmachari S AUID- ORCID: 0000-0002-5816-8805 AD - Department of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Sciences , Tel Aviv University , Tel Aviv 69978 , Israel. FAU - Lei, Jiangtao AU - Lei J AD - State Key Laboratory of Surface Physics, Key Laboratory for Computational Physical Science (Ministry of Education), Collaborative Innovation Center of Advanced Microstructures, and Department of Physics , Fudan University , Shanghai 200433 , People's Republic of China. FAU - Gilead, Sharon AU - Gilead S AD - Department of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Sciences , Tel Aviv University , Tel Aviv 69978 , Israel. FAU - Tang, Yiming AU - Tang Y AD - State Key Laboratory of Surface Physics, Key Laboratory for Computational Physical Science (Ministry of Education), Collaborative Innovation Center of Advanced Microstructures, and Department of Physics , Fudan University , Shanghai 200433 , People's Republic of China. FAU - Gazit, Ehud AU - Gazit E AD - Department of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Sciences , Tel Aviv University , Tel Aviv 69978 , Israel. FAU - Wei, Guanghong AU - Wei G AUID- ORCID: 0000-0001-5814-3328 AD - State Key Laboratory of Surface Physics, Key Laboratory for Computational Physical Science (Ministry of Education), Collaborative Innovation Center of Advanced Microstructures, and Department of Physics , Fudan University , Shanghai 200433 , People's Republic of China. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20180723 PL - United States TA - ACS Chem Neurosci JT - ACS chemical neuroscience JID - 101525337 RN - 0 (Amyloid) RN - 0 (Islet Amyloid Polypeptide) RN - 0 (Nanotubes, Carbon) SB - IM MH - Amyloid/*metabolism/ultrastructure MH - Circular Dichroism MH - Computer Simulation MH - Diabetes Mellitus, Type 2/*metabolism/pathology MH - Humans MH - Hydroxylation MH - In Vitro Techniques MH - Inverted Repeat Sequences MH - Islet Amyloid Polypeptide/*metabolism/ultrastructure MH - Microscopy, Atomic Force MH - Microscopy, Electron, Transmission MH - Molecular Dynamics Simulation MH - *Nanotubes, Carbon MH - Protein Aggregation, Pathological/*metabolism/pathology MH - Protein Conformation, beta-Strand OTO - NOTNLM OT - TEM experiment OT - human islet amyloid polypeptide OT - hydroxylated carbon nanotubes OT - inhibitory mechanism OT - protein aggregation OT - replica exchange molecular dynamics simulations EDAT- 2018/07/11 06:00 MHDA- 2019/12/24 06:00 CRDT- 2018/07/11 06:00 PHST- 2018/07/11 06:00 [pubmed] PHST- 2019/12/24 06:00 [medline] PHST- 2018/07/11 06:00 [entrez] AID - 10.1021/acschemneuro.8b00166 [doi] PST - ppublish SO - ACS Chem Neurosci. 2018 Nov 21;9(11):2741-2752. doi: 10.1021/acschemneuro.8b00166. Epub 2018 Jul 23.